Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1300 ATGGAAACTTGTACGGCTCTATTGATTTTAACGGCTATTACAGCTTACTTATTGTGGTTCACTTTCATCTCACGGTCATTGAGAGGTCCACGTGTCTGGCCACTATTGGGCAGTCTACCGGGCCTAATCGAAAATTGTGAACGTATGCATGATTGGATCTGTGACAACCTCCGCGCGTGTGGTGGCACATACCAGACCTGCATCTGTGCAATCCCTTTTTTAGCTAAGAAGCAAGGTCTCGTGACCGTCACGTGCGACCCGAGGAACTTGGAGCATATACTGAAGACCCGGTTCGACAATTACCCGAAAGGTCCGACGTGGCAAGCAGTGTTTCATGATTTGTTGGGTGATGGAATCTTTAACTCTGATGGTAACACGTGGTTGTTCCAGCGTAAAACAGCCGCGCTGGAATTTACCACCCGGACATTGCGCCAAGCCATGGCTCGATGGGTTAGCCGAGCCATTAAGGACCGGCTTTGCACAATTTTGAAGAAAGCTGAGGTGCAAGGTGAGCCGGTGGATCTACAAGACGTGATGCTCCGGCTCACGTTTGACAATATTTGTGGTTTGGCTTTTGGGAGAGACCCGCAAACATGTGCCACGGGTTTGCCTGAAAACGGCTTTGCAGCCGCTTTTGATAAAGCCACTGAAGCCACGCTTCAGCGGTTTATTTTACCTGAGGTGTTGTGGAAGGTGAAGAAATGGCTTGGACTTGGTATGGAAGTCGGCTTGAGCCGAAGCCTTGGTTTTGTGGACGAGCATTTGTCAAGTGTGATTGAGAAGCGTAAAGTCGAATTGATGAGTCAGCAGAAAGATGGGTCCCTTCTTCATGATGACCTGCTGACTAGGTTTATGAGGAAGAAAGAATCTTATTCAGACAAGTTTCTTCAACATGTGGCATTGAACTTCATCCTAGCTGGACGTGACACATCATCGGTTGCGTTGAGCTGGTTTTTCTGGTTGGTCATTCAAAATCCAAGGGTGGAAGAGAAGATCCTACGCGAGATTTGCACGGTCTTGATGGAGACACGTGGCACTGACATGGAAAAGTGGACGGATGAGCCGTTGGGATTTGAAGAAGTTGATCAATTGGTTTATCTTAAAGCTGCCTTGTCGGAGACACTAAGGTTGTACCCTTCGGTGCCAGAGGATTCAAAGCATGTGGTGAACGATGATGTGTTGCCGGATGGAACTTTTGTTCCGGCAGGATCATCGGTGACATACTCGATATATTCAGCCGGGAGATTAAAGTCAACATGGGGTGAGGATTGCTTGGAATTTAGACCTGAGAGGTGGTTGTCATTGGATGGAACAAAGTTCATCATGCATGACTCTTTCAAGTTTGTTGCATTCAATGCTGGCCCTAGAATCTGTTTGGGGAAGGATTTGGCATATCTTCAAATGAAGTCTATTGCTGCTGCTGTTCTGCTCCGCCACCGTCTTGCGGTGGTTCCCGGCCACCAGGTGGAGCAAAAGATGTCACTCACCTTGTTCATGAAAAATGGGCTCAAGGTTAATGTTTACAACAGGGATTTGAAGGGTGTTTTTGCAAATATAGAAAATGCAAAGGTGGGAGATATTCAGGGGAAAGTGTCCAATGATTTGAAATGCAATGGAAGTTAG 1623 0.4707 METCTALLILTAITAYLLWFTFISRSLRGPRVWPLLGSLPGLIENCERMHDWICDNLRACGGTYQTCICAIPFLAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHDLLGDGIFNSDGNTWLFQRKTAALEFTTRTLRQAMARWVSRAIKDRLCTILKKAEVQGEPVDLQDVMLRLTFDNICGLAFGRDPQTCATGLPENGFAAAFDKATEATLQRFILPEVLWKVKKWLGLGMEVGLSRSLGFVDEHLSSVIEKRKVELMSQQKDGSLLHDDLLTRFMRKKESYSDKFLQHVALNFILAGRDTSSVALSWFFWLVIQNPRVEEKILREICTVLMETRGTDMEKWTDEPLGFEEVDQLVYLKAALSETLRLYPSVPEDSKHVVNDDVLPDGTFVPAGSSVTYSIYSAGRLKSTWGEDCLEFRPERWLSLDGTKFIMHDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLAVVPGHQVEQKMSLTLFMKNGLKVNVYNRDLKGVFANIENAKVGDIQGKVSNDLKCNGS* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1300 540 PANTHER CYTOCHROME P450 4 512 - -
Tpr5g1300 540 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 SUPERFAMILY Cytochrome P450 27 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 PANTHER CYTOCHROME P450 86A7 4 512 - -
Tpr5g1300 540 Pfam Cytochrome P450 28 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g1300 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1300 Tpr-Chr5 25467544 25470514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1300 1 533 Cytochrome P450 AT2G45970 77.341 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1300 K15398 - gmx:100779986 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1300 5 25467544 25470514 Tpr5g1300 5 25467544 25470514 ECH