Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1296 ATGAATCAACAAAATATAGATGCAAATAAATGTCTTTTATGTAAGCGTTTGAGAACAACATGTAATAATAATAATAATTGTGAATTTGGCATGTACTTTCCTCCCCATAGAAATGATGATTTTAAGTGTGCTCTTGAGGTTTATGGATTAACTAATATCATTAGAATCATGCAATCTGTGGAAGAAGATCAAAGACAAGCCACTGCAAATTCACTTCTTTTTGAAGGTTTTTCTTGGAGATTTCATCCAACTAATGGTTTATTTGGGTATAAGTCATTTATGGATGAACAAATAAATTCATCTTTGCGTGAACTACAAATTTTAAATAGCCTTTTGAAGTTTTGTAAGGATCATGAAAACTCAAATTCTCAAAGGAATGATGGAATTCCAACTACTCGTGAAAGAGGAGAATCAAGTAATGCTGCATCCAAGGGAAATACTCAAGAGAAAGAAAAGGGAAAACAAGTTCTTATTGATCTAAATGAACCAGCTGATGATGAGGCCACTCAAGAGAAAGAAAAGGGAAAACAATTTCTTATTGATCTAAATGAACCGGCTAATGATGAAGAGGAAGATTAA 579 0.323 MNQQNIDANKCLLCKRLRTTCNNNNNCEFGMYFPPHRNDDFKCALEVYGLTNIIRIMQSVEEDQRQATANSLLFEGFSWRFHPTNGLFGYKSFMDEQINSSLRELQILNSLLKFCKDHENSNSQRNDGIPTTRERGESSNAASKGNTQEKEKGKQVLIDLNEPADDEATQEKEKGKQFLIDLNEPANDEEED* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1296 192 MobiDBLite consensus disorder prediction 124 146 - -
Tpr5g1296 192 MobiDBLite consensus disorder prediction 119 192 - -
Tpr5g1296 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25-LIKE 9 151 - -
Tpr5g1296 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 151 - -
Tpr5g1296 192 MobiDBLite consensus disorder prediction 147 179 - -
Tpr5g1296 192 ProSiteProfiles LOB domain profile. 9 112 IPR004883 -
Tpr5g1296 192 Pfam Lateral organ boundaries (LOB) domain 10 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1296 Tpr-Chr5 25426464 25427919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1296 1 107 AS2 family AT2G19820 31.481 6.23e-13 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr5g1296 LOB 3.3e-17 No_clan