Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1292 ATGGCGGATAGCGTGGTTTCGTTCCTTTTGGGACACTTATCCCAATTGCTTCAACATGAAGCTAACTTGTTGTTTGGAGTGGAAGACAAAATACAATCCCTCCAAAACGAACTCGAAATCATAAACGCCTACCTCAAAACTTCCTCTAAAGGGAACAAGAACAACAACAAAGAAATAGAAAAAATAGTTCTGAGTCAGATCAGAGATGCCGCTCACCAAGCTGAGGATGTCATCGATACGTTCATTGCCAACGTGGCCATCTACAAGAGGAGAAATGTGCTCGGAAGAATGCTTCACAGCGTTGATCACGCAAAGTTGCTCCACGACGTAGCAGAGAATATTGATAAGATCAAAACCAAACTGAAAGATATACATGAAAGAAACATCAAATACAATCAAGAAAGCAGTAACCAATCAACATCAGCAACAGAAGAGGAAGAGAGGAAACGGTCGCTGCAAAGATTAAGAAGAAATGTGGAGGAGGAAAATGTAGTGGGATTTGTCCATGAATCTGAAGCAGTCATCAATAGACTCATAGAGGGTCATCCACTGCATCTCAACGTCATTTCAATCATTGGTATGGGTGGATTGGGAAAAACTACTCTTGCAAGAAAGGTCTACAACAGTGACAAGGTGAAGAAACACTTCAATTGTCACGCCTGGGTTTCCGTTTCAAACGAGTGTCGAACTAGGGAACTTTTGCTTGGCCTTCTTCAAAATTTGATGCCAGAACATGATTATGAATCTAGAAGCGGCAACAAAATAAAAAAGAAGGGTAAGAAGAAACACAACGAAGCTGTGAGTAACTCACAAGGCTTCTCTAGCTTAAGTGATGATGAGCTTAAGAAAAGAGTGTGGGAATTCTTGAAGTTGAAAAAGTATATGCTGGTTCTTGATGACTTGTGGAAAATACAAGATTGGGATGAGATCAAAGATGCTTTTCCCGATGAAAACAAAGGGAGCAGAATACTAGTAACTAGTCGTTTGAAAGAAGTTGCTTTGCATACCGGTCGAGATCCTTACTACCTTCAATTTCTCAATGAAGAACAAAGTTGGGAGCTCTTCTACAAAAAAGTGTTTAGAGGAGAAGAGTACCCTTGTGATCTTGAATCTCTTGGTAAAGAAATCGTTAAAAGTTGTGGCGGTTTGCCACTCTCAATTGTGGTGCTTGCTGGACTTCTAGCAAACAAAGAAAAGTCACACAGAGAATGGTCCAAAGTTTTGGGTCATGTTAACTGGTATCTTACTCAAGACAAGGAGACTAACGTCAAGGATGTAGTACTTAAACTCAGTTTGGACGACTTGCCTTCAAGATTAAAACCATGTTTTCTGTATCTAGGGATATTCCCCGAAGATTCTGAAATACATGTAAGGCGATTGTTGCAGCTATGGGTCGCTGAAGGATTTATACAAGAAACTGGTAGGAGAGATGCATATGATGTTGCTGAAGACTACTTGTATGAGCTCATTGATCGTAGTTTGATCCAAGTAGTACGAGTGGAAGATATCGAAGGTGTGCAAACATGTCGCATCCATGATCTTCTTAGAGATCTCTGCATATTAGAGAGCAAAGAGGACAAGATCTTCGAAGTTTGTACGGAAACCAATATTTTAATCCCGTCAAAACCTCGTAGATTGTCTGTTCATTCTACAATGTGTCAGTATATTTCTTCAAGTACCAAAGACCTTTCATGTGTCCGTTCTTTGTTTTTCTCTAACCCGGACTACTTCGTTGCTAGCGACAAGTGGAAATTGCTTACGAAAGACATCAAATTGGTTCGTGTATTGGATTTGGATCTTGAGAGTAGTAAGATTCCTTCCAATTTGGGTAACTTTATTCACTTGAGGTACTTAAGAATAGGCTCAGATTTTTCTTTTTGGAGCGTTCCAGATTCTATATGCAACCTTCAAAATCTACAAACATTATGCTTTGGACCGCCAACCGGGTTCGTCTTATATGGCATCCCAATTTCATTTCCATATGGAATAATAAAGCTCAAGCATCTAACACATGTGTATACTAATAGGCCTATCGTGCTACGCGGCAGCAGTTCCAAATTAGATGGTGAAGTTATGTGGCGCCTTCAAACAATCGGTTTCATTGAACTTGATGAGAAAACAACATATCTCATAGAGAAAGGAAGTTTCCCCAAATTAAGAACAATACGAGTGCAGATCATCAAAGGTGATGTGCCTACAATGTTGTTATGCCTGCAAAAATTGATGCATTTGAATGAGCTAGAAATCCAAGTCCAATTAGATGAGATCTTTGTAAGGATCGTTCTTAATCCGGAGGAAGTGCTACAAAGTTTGAAACACTTAACACATCTGAGTATTCTAAAAATCACTCACCTCCCCAACCTTGAAACACATGTGACCATGTTTCCTCCCAACATTACCAAGTTAGCATTGGTACGTATTGGTTACTTGAATGATGACGGGATGAAAGTTATTGGAAGTCTCGCCAAACTCCAAATTTTTATCTTAAGTGGATCATTTGACGGCAGTTTTGACTCGGCCTCATGTTTTGATCTTAATTTTGCTCAAGATGGGTTCCCACAGTTGCAGGAGTTTCAAATGGCAGATTTTCCAATTAGAAACTGGAAATTAGCCAATGGTTCGATGTCACGCCTTCAAATTCTCACTGTAGACAACTGTCCTGTGTTGGACAGCCTCCCAAGTGAACTGTGGTCTTTGACTACCTTAAGAAAAGTCTGTGTTCGAAAACCCTCCGATGCAATGGCTGCAATGTTACAAAATTTGGAAGTTAATAATGAATGTGAGCTCATTGTAGAATAA 2799 0.398 MADSVVSFLLGHLSQLLQHEANLLFGVEDKIQSLQNELEIINAYLKTSSKGNKNNNKEIEKIVLSQIRDAAHQAEDVIDTFIANVAIYKRRNVLGRMLHSVDHAKLLHDVAENIDKIKTKLKDIHERNIKYNQESSNQSTSATEEEERKRSLQRLRRNVEEENVVGFVHESEAVINRLIEGHPLHLNVISIIGMGGLGKTTLARKVYNSDKVKKHFNCHAWVSVSNECRTRELLLGLLQNLMPEHDYESRSGNKIKKKGKKKHNEAVSNSQGFSSLSDDELKKRVWEFLKLKKYMLVLDDLWKIQDWDEIKDAFPDENKGSRILVTSRLKEVALHTGRDPYYLQFLNEEQSWELFYKKVFRGEEYPCDLESLGKEIVKSCGGLPLSIVVLAGLLANKEKSHREWSKVLGHVNWYLTQDKETNVKDVVLKLSLDDLPSRLKPCFLYLGIFPEDSEIHVRRLLQLWVAEGFIQETGRRDAYDVAEDYLYELIDRSLIQVVRVEDIEGVQTCRIHDLLRDLCILESKEDKIFEVCTETNILIPSKPRRLSVHSTMCQYISSSTKDLSCVRSLFFSNPDYFVASDKWKLLTKDIKLVRVLDLDLESSKIPSNLGNFIHLRYLRIGSDFSFWSVPDSICNLQNLQTLCFGPPTGFVLYGIPISFPYGIIKLKHLTHVYTNRPIVLRGSSSKLDGEVMWRLQTIGFIELDEKTTYLIEKGSFPKLRTIRVQIIKGDVPTMLLCLQKLMHLNELEIQVQLDEIFVRIVLNPEEVLQSLKHLTHLSILKITHLPNLETHVTMFPPNITKLALVRIGYLNDDGMKVIGSLAKLQIFILSGSFDGSFDSASCFDLNFAQDGFPQLQEFQMADFPIRNWKLANGSMSRLQILTVDNCPVLDSLPSELWSLTTLRKVCVRKPSDAMAAMLQNLEVNNECELIVE* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1292 932 CDD RX-CC_like 2 124 IPR038005 -
Tpr5g1292 932 Gene3D Ribonuclease Inhibitor 529 929 IPR032675 -
Tpr5g1292 932 Gene3D - 148 339 IPR027417 -
Tpr5g1292 932 Coils Coil 142 162 - -
Tpr5g1292 932 PRINTS Disease resistance protein signature 188 203 - -
Tpr5g1292 932 PRINTS Disease resistance protein signature 380 394 - -
Tpr5g1292 932 PRINTS Disease resistance protein signature 873 889 - -
Tpr5g1292 932 Gene3D - 432 521 IPR036388 -
Tpr5g1292 932 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 446 IPR027417 -
Tpr5g1292 932 PANTHER - 46 930 - -
Tpr5g1292 932 SUPERFAMILY L domain-like 510 907 - -
Tpr5g1292 932 Coils Coil 107 134 - -
Tpr5g1292 932 PANTHER DISEASE RESISTANCE PROTEIN RP 46 930 IPR044974 GO:0006952
Tpr5g1292 932 MobiDBLite consensus disorder prediction 248 269 - -
Tpr5g1292 932 MobiDBLite consensus disorder prediction 130 149 - -
Tpr5g1292 932 Pfam NB-ARC domain 172 433 IPR002182 GO:0043531
Tpr5g1292 932 Gene3D - 5 111 - -
Tpr5g1292 932 Pfam Rx N-terminal domain 5 85 IPR041118 -
Tpr5g1292 932 Gene3D - 345 431 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1292 Tpr-Chr5 25389628 25392827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1292 175 518 WRKY Transcription Factor Family AT5G45050 23.478 1.09e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1292 - - gmx:100814688 1002.66