Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1290 ATGATTGCAATGTTGTGCTCTATACATGCAGTGGGAGGTAAATTTCCAGCAAATGCATTGACAAGGCAAGAAGTTAAAGCATACAGGGAAATTGAAAGTCAAGACATGCATAAGACTCTAGATTCTTATCTTCTTATCTGTCAAAGAATGGGGGTGAGGGCAAATAAATTGCACATTGAAATGGATTGCATTGAAAAAGGGATTATAGAGCTTATATCCCAACATAACATACAAAACCTTGTAATGGGAGCAGCTTCTGATAAGTACCACTCTAGGAGGATGACAGGTCTAAGATCTAAGAAAGCCATCTATGTATGTGAACAAGCTCCAGCTTCTTGTCATATACAGTTTATCTGCAAAGGCTATCTTATACAGACAAGGGATTGCAGTATGGATAAACTTAGAGTAGAGGGCACATCTCCTTTGGCAAAGCAAATGCAAAACTCTGAAGTTGGTCACTCACCTCACTTAAGATCTAAATCAATTTCACATGATCAAGAATTACTTCATCATAGAGTAAGATCTATGAGCTCAGTATCTGAAAGTGGAAGGAGCATAGCATCATCTGTTGCTTCTTCAGAATGGTTTTCAACTCCACAAAGCAAGTTTGATAACGAACCAAGTTATAGTCCTTCACCTTCATCAGTTGAAACTGCGGCATCGAACACAAATTTGATTAGTGATGGCAGTGAGAATGTGTTGGACTTGAAGAGTTACCTGTCTAGTATCAAAGAGGAGGATCTTTATCATGCATCACCTCCTAGTGTGCTGCAGGATGGAACAAGGGATGATAGTGTGTATGATCAACTTGAACAAGCTATGGCTGAGGCTGAGAAAGCTAGGTGGGATGCTTATCAAGAAACTGTTAGGCGTCGAAAAGCTGAAAAAGATGTCTTGGATGTGATACGCAAGAATAAAGACACCAAAATCTTGTACGAAGAAGAGGTGAAACTACGGAAATACTTAGAAGAGGCGCTAGAGAAAGCAAAAGAAGAAATTGATAACATGAGAAGCCAAATCGAAAAAGTCAATAAGGAACTCGAACTTGCCTTGGATCACAAGTCATCACCTGAGAATCAAATTGGTGAAGCCTCAAGAACACAATCTCTTCAACTTTTGTCAGAGTTTTCTTTTTCAGAGATTGAAGAAGCAACATGTAACTTCAATCCATCGTTAAAGATTGGTGAAGGCGGATACGGAAGTATATTTAAAGGCATCCTTCGTCACACCGAAGTGGCTATAAAAATGTTGAACCCTAACAGCACTCAAGGACCCTTGGAGTTTCAACAAGAGGTTACGGTATTGAGCAAGTTAAGGCATCGAAATCTTGTCACACTTATAGGAGCAAACCAAGAAACAAGGACTCTTATCTATGAATATTTACCCAATGGAAGTCTCGAGGATCATCTCAGCCGCAACAGTAATACCTCTCCATTATCATGGCAGGCTCGAATTCGCATTGCGACAGAACTTTGTTCTGCACTCATTTTTCTCCATTCCAATAAACCTCACAGCATAGTGCATGGTGATTTAAAACCATCAAACATTCTTCTTGATGTAAACTTCGTAAGCAAACTTAGCGACTTTGGAATTTGTCGTATATTATCGTGTCAAGACGATTCTTCAAGTAACAACAGTAGTACACAGTTTTGGATCACTAAATTTGCAAAGGGGACTTTTGCATACATGGATCCTGAATTCTTCGGTACAGGTGAACTTGCTACAAAATCAGATGTTTATTCATTTGGAATTGTGTTATTGAGATTAATAACTGGAAAACTAGCATTAGGGATAAAGAATGAAGTGTTATATGCATTAAATAATGCCGGTGGAGAATTGAAATCACTTTTGGATCCTTTGGCCGGAGATTGGCCTATTGCAGAAGCCGAAAATTTGATTCATTTGGCTTTGAGGTGTTGTGATATGAATAAAAGGAGAAGGCCAGAACTTTGTTCAGATGTGTGGAAAGTGTTGGAACCAATGAGAGCTTCTTGTAGTGGCGCAATCACGAACACTTTTGGTCCTATGTCCTGTTTGGATAAACAACTTAATCGAACGACTTAA 2064 0.3905 MIAMLCSIHAVGGKFPANALTRQEVKAYREIESQDMHKTLDSYLLICQRMGVRANKLHIEMDCIEKGIIELISQHNIQNLVMGAASDKYHSRRMTGLRSKKAIYVCEQAPASCHIQFICKGYLIQTRDCSMDKLRVEGTSPLAKQMQNSEVGHSPHLRSKSISHDQELLHHRVRSMSSVSESGRSIASSVASSEWFSTPQSKFDNEPSYSPSPSSVETAASNTNLISDGSENVLDLKSYLSSIKEEDLYHASPPSVLQDGTRDDSVYDQLEQAMAEAEKARWDAYQETVRRRKAEKDVLDVIRKNKDTKILYEEEVKLRKYLEEALEKAKEEIDNMRSQIEKVNKELELALDHKSSPENQIGEASRTQSLQLLSEFSFSEIEEATCNFNPSLKIGEGGYGSIFKGILRHTEVAIKMLNPNSTQGPLEFQQEVTVLSKLRHRNLVTLIGANQETRTLIYEYLPNGSLEDHLSRNSNTSPLSWQARIRIATELCSALIFLHSNKPHSIVHGDLKPSNILLDVNFVSKLSDFGICRILSCQDDSSSNNSSTQFWITKFAKGTFAYMDPEFFGTGELATKSDVYSFGIVLLRLITGKLALGIKNEVLYALNNAGGELKSLLDPLAGDWPIAEAENLIHLALRCCDMNKRRRPELCSDVWKVLEPMRASCSGAITNTFGPMSCLDKQLNRTT* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1290 687 Gene3D Phosphorylase Kinase; domain 1 359 460 - -
Tpr5g1290 687 PANTHER U-BOX KINASE FAMILY PROTEIN 360 668 - -
Tpr5g1290 687 PANTHER U-BOX KINASE FAMILY PROTEIN 10 349 - -
Tpr5g1290 687 SMART serkin_6 388 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1290 687 Gene3D Transferase(Phosphotransferase) domain 1 461 672 - -
Tpr5g1290 687 CDD STK_N 15 121 - -
Tpr5g1290 687 ProSiteProfiles Protein kinase domain profile. 388 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1290 687 Coils Coil 312 353 - -
Tpr5g1290 687 SUPERFAMILY Protein kinase-like (PK-like) 369 659 IPR011009 -
Tpr5g1290 687 PANTHER OS02G0152300 PROTEIN 360 668 - -
Tpr5g1290 687 PANTHER OS02G0152300 PROTEIN 10 349 - -
Tpr5g1290 687 Coils Coil 267 287 - -
Tpr5g1290 687 Pfam Protein kinase domain 392 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1290 687 ProSitePatterns Protein kinases ATP-binding region signature. 394 415 IPR017441 GO:0005524
Tpr5g1290 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1290 Tpr-Chr5 25369012 25374240 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1290 5 674 U-box Gene Family AT2G45910 44.979 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr5g1290 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1290 - - mtr:MTR_8g030690 1011.52