Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1289 ATGGCGGATAGCGTGGTTTCGTTCCTTTTGGGACACTTATCCCAATTGCTTCAACATGAAGCTAACTTGTTGTTTGGAGTGGAAGACAAAATACAATCCCTCCAAAACGAACTCGAAATCATAAACGCCTACCTCAAAACTTCCTCTAAAGGGAACAAGAACAACAACAAAGAAATAGAAAAAATAGTTCTGAGTCAGTTCAGAGATGCCGCTCACCAAGCTGAGGATGTCATCGATACGTTCATTGCCAACGTGGCCATCTACAAGAGGAGAAATGTGCTCGGAAGAATGCTTCACAGCGTTCATCATGCAAAGTTGCTCCACGACGTAGCAGAGAATATTGATAAGATCAAAACCAAACTGAAAGATATACATGAAAGCAACATCAAATACAATCAAGAAAGCAGTAACCAATCAACATCAGCAACAGAAGAGGAAGAGAGGAAACGGTCGCTGCAAAGATTAAGAAGAAATGTGGAGGAGGAAAATGTAGTGGGATTTGTCCATGAATCTGAAGCAGTCATCAATAGACTCATAGAGGGTCATCCACTGCATCTCAACGTCATTTCAATCGTTGGTATGGGTGGATTGGGAAAAACTACTCTTGCAAGAAAGGTCTACAACAGTGACAAGGTGAAGAAACACTTCAATTGTCGCGCCTGGGTTTCCGTTTCAAACGAGTGTCGAACTAGGGAACTTTTGCTTGGCCTTCTTCAAAATTTGATGCCAGAACATGATTATGAATCTAGAAGCGGCAACAAAATAAAAAAGAAGGGTAAGAAGAAACACAACGAAGCTGTGAGTAACTCACAAGGCTTCTCTAGCTTAAGTGATGATGAGCTTAAGAAAAGAGTGTGGGAATTCTTGAAGTTGAAAAAATATCTACTGATTCTTGATGACATGTGGAAAATACAAGATTGGGATGAGATCAAAGATGCTTTTCCCAATGAAAACAAAGGGAGCAGAATACTAATAACTAGTCGTTTGAAAGAAGTTGCTTTGCATACCGGTCGAGATCCTTACTACCTTCAATTTCTCAATGAAGAACAAAGTTGGGAGCTCTTCTACAAAAAAGTGTTTAGAGGAGAAGAGTACCCTTGTGATCTTGAATCTCTTGGTAAAGAAATTGTTAAAAGTTGTGGCGGTTTGCCACTCTCAATTGTGGTGCTTGCTGGACTTCTAGCAAACAAAGAAAAGTCACACAGAGAATGGTCCAAAGTTTTGGGTCATGTTAACTGGTATCTTACTCAAGACAAGGAGACTAACGTCAGGGATGTAGTACTTAAACTCAGTTTGGACGACTTGCCTTCAAGATTAAAACCATGTTTTCTGTATCTAGGGATATTCCCCGAAGATTCTGAAATACATGTAAGGCGATTGTTGCAGCTATGGGTCGCTGAAGGATTTATACAAGAAACTGGTAGCAGAGATGCATATGATGTTGCTGAAGACTACTTGTATGAGCTCATTGATCGTAGTTTGATCCAAGTAGCACGAGTGGAAGATATCGAAGGTGTGCAAACATGTCGCTTCCATGATCTTCTTAGAGATCTCTGCATATTAGAGAGCAAAGAGGACAAGATCTTCGAAGTTTGTACAGAAACCAATATTTTAATCTGGTCAAAACCTCGTAGATTGTCTGTTCATTCTACAATTTCTCACTATGTTTCTTCAAGCACCAAACACCATTCATGTGTCCGCTCTTTGTTTGTCTCTGTTCCGAACTACTTGGTTGAAAACGACGAGTTGAAATGGCTTACCAAAGACTTCAAATTGGTTCGGGTATTGGATTTGGATCTTGAGAGTTATAAGATTCCTTCCAATTTGGGTAACTTTATTCACTTGAGGTACTTAAGAATAGGCTCAGCAGGTATTTGCAGCGTTCCAGATTCTATATGCAACCTTCAAAATCTACAAACATTATGCTTTGAACCGTCAACCCTGTACTTTCATGACATCCCAATTTCATTTCCATATGGAATAATAAAGCTCAAGCATCTAACACATGTGCATACCGATAGGCCTATCGTGCTACGCGGCAGCAGTTCTAAATTAGATGGTGAAGTTATGTGGCGCCTTCAAACAATCGGTTTCATTGCACTTGATAAGAAAACAACATATCTCATAGAGAAAGGAAGTTTCCCCAAATTAAGAACAATACGAGTGCATATCGTCAAAGGTGATGTGCCTACAATGTTGTTATGCCTGCAAAAATTGATGCATTTGAATGAGCTAGAAATCCAATTATATAAGATCTTTGAAAGGTATGTTCGTAATCCGGAGGAAGTGCTACAAAGTTTGAAACACTTAACACATCTGAGTATTCTAAAAATCAATTACCTCCCCAACCTTGTAACACATGTGACCATGTTTCCTCCCAACATTACCAAGTTAGCATTGGTACGTATTGAAAGCTTGAATGATGACGGGATGAAAGTTATTGGAAGTCTCGCCAAACTCCAAATTTTTATCTTAAGTGGATCATTTTACGGCAGTCGTGCCTCGGGTTCATGTTTTGATTTTAATTTTGCTCAAGATGGGTTCCCACAGTTGCAAGAGTTTCAAATGGCAGATTTTCCAATTAGAAACTGGAAATTAGCCAATGGTTCGATGTCACGCCTTCAAATTCTCACTGTAGACAACTGTCCTGTGTTGGACAGCCTCCCAAGTGAACTGTGGTCTTTGACTACCTTAAGAAAAGTCTGTGTTCGAAAACCCTCCGATGCAATGGCTGCAATGTTACAAAATTTGGAAGTTAATAATGAATGTGAGCTCATTGTAGAATAA 2787 0.3958 MADSVVSFLLGHLSQLLQHEANLLFGVEDKIQSLQNELEIINAYLKTSSKGNKNNNKEIEKIVLSQFRDAAHQAEDVIDTFIANVAIYKRRNVLGRMLHSVHHAKLLHDVAENIDKIKTKLKDIHESNIKYNQESSNQSTSATEEEERKRSLQRLRRNVEEENVVGFVHESEAVINRLIEGHPLHLNVISIVGMGGLGKTTLARKVYNSDKVKKHFNCRAWVSVSNECRTRELLLGLLQNLMPEHDYESRSGNKIKKKGKKKHNEAVSNSQGFSSLSDDELKKRVWEFLKLKKYLLILDDMWKIQDWDEIKDAFPNENKGSRILITSRLKEVALHTGRDPYYLQFLNEEQSWELFYKKVFRGEEYPCDLESLGKEIVKSCGGLPLSIVVLAGLLANKEKSHREWSKVLGHVNWYLTQDKETNVRDVVLKLSLDDLPSRLKPCFLYLGIFPEDSEIHVRRLLQLWVAEGFIQETGSRDAYDVAEDYLYELIDRSLIQVARVEDIEGVQTCRFHDLLRDLCILESKEDKIFEVCTETNILIWSKPRRLSVHSTISHYVSSSTKHHSCVRSLFVSVPNYLVENDELKWLTKDFKLVRVLDLDLESYKIPSNLGNFIHLRYLRIGSAGICSVPDSICNLQNLQTLCFEPSTLYFHDIPISFPYGIIKLKHLTHVHTDRPIVLRGSSSKLDGEVMWRLQTIGFIALDKKTTYLIEKGSFPKLRTIRVHIVKGDVPTMLLCLQKLMHLNELEIQLYKIFERYVRNPEEVLQSLKHLTHLSILKINYLPNLVTHVTMFPPNITKLALVRIESLNDDGMKVIGSLAKLQIFILSGSFYGSRASGSCFDFNFAQDGFPQLQEFQMADFPIRNWKLANGSMSRLQILTVDNCPVLDSLPSELWSLTTLRKVCVRKPSDAMAAMLQNLEVNNECELIVE* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1289 928 CDD RX-CC_like 2 124 IPR038005 -
Tpr5g1289 928 Pfam Rx N-terminal domain 5 85 IPR041118 -
Tpr5g1289 928 Gene3D - 432 521 IPR036388 -
Tpr5g1289 928 SUPERFAMILY L domain-like 510 903 - -
Tpr5g1289 928 Coils Coil 142 162 - -
Tpr5g1289 928 MobiDBLite consensus disorder prediction 128 149 - -
Tpr5g1289 928 Gene3D Ribonuclease Inhibitor 529 924 IPR032675 -
Tpr5g1289 928 Coils Coil 920 928 - -
Tpr5g1289 928 Gene3D - 5 111 - -
Tpr5g1289 928 PANTHER DISEASE RESISTANCE PROTEIN RP 46 926 IPR044974 GO:0006952
Tpr5g1289 928 PRINTS Disease resistance protein signature 188 203 - -
Tpr5g1289 928 PRINTS Disease resistance protein signature 380 394 - -
Tpr5g1289 928 PRINTS Disease resistance protein signature 869 885 - -
Tpr5g1289 928 Pfam NB-ARC domain 172 433 IPR002182 GO:0043531
Tpr5g1289 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 446 IPR027417 -
Tpr5g1289 928 MobiDBLite consensus disorder prediction 248 269 - -
Tpr5g1289 928 Gene3D - 157 339 IPR027417 -
Tpr5g1289 928 Gene3D - 345 431 IPR042197 -
Tpr5g1289 928 PANTHER - 46 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1289 Tpr-Chr5 25334930 25341241 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1289 175 518 WRKY Transcription Factor Family AT5G45050 22.609 2.62e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1289 - - gmx:100814688 1015.76