Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1287 ATGGTGGATAGCGTGGTTTCATCCCTTTTGGGGCACTTATCCCAATTGCTTCAACATGAAGCTAACTTGTTGTTTGGAGTGGAAGACAAAATCAAATCCCTCCAAAACGAACTCGAAATCATAAACGCCTACCTCAAAACTTCCTCTAAAGGGAACAAGAACAACAACAACAAAGAAATAGAAAAAACGGTTAGACGTTTGATCAGAGAAGAAGCCCACCAAGCTGAGGATGTCATCGACACATTTATTGCCAACGTCGTCATCTACAAGAGGAGAAACGTGGTGGGAAGAATGTTTTACAGTATTGCTCATGCAAAGTTGCGCCGCAACGTTGCAGAGAAAATTGACAAGATCAAAACCACACTGAAAGAGATACATGAACACAACATCAAATACAATCAAGAAAGCAGTAACCAATCAACATCAGCAACAGAAGAGGAAGAGAGGAAACGGTCGCTGCAAAGATTAAGAAGAAATGTGGAGGAGGAAAATGTAGTGGGATTTGTCCATGAATCTGAAGCAGTCATCAATAGACTCATAGAGGGTCATCCACTGCATCTCAACGTCATTTCAATCATTGGTATGGGTGGATTGGGAAAAACTACTCTTGCAAGAAAGGTCTACAACAGTGACAAGGTGAAGAAACACTTCAATTGTCACGCCTGGGTTTCCGTTTCAAACGAGTGTCGAACTAGGGAACTTTTGCTTGGCCTTCTTCAAAAATTGATGCCAAAACATGATTATGAATCTAGAAACGGCAACAAAATAAAAAAGAAGGGTAAGAAGAAACACAACGAAGCTGTGAGTAACTCACAAGGCTTCTCTAGCTTAAGTGATGATGAGCTTAAGAAAAGAGTGTGGGAATTCTTGAAGTTGAAAAAATATCTACTGATTCTTGATGACATGTGGAAAATACAAGATTGGGATGAGATCAAAGATGCTTTTCCCGATGAAAACAAAGGGAGCAGAATACTAATAACTAGTCGTTTGAAAGAAGTTGCTTTGCATACCGGTCGAGATCCTCCTTACTACCTTCAATTTCTCAATGAAGAACAAAGTTGGGAGCTCTTCTACAAAAAAGTGTTTAGAGGAGAAGAGTACCCTTGTGATCTTGAATCTCTTGGTAAAGAAATCGTTAAAAGTTGTGGCGGTTTGCCACTCTCAATTGTGGTGCTTGCTGGACTTCTAGCAAACAAAGAAAAGTCACACAGAGAATGGTCCAAAGTTTTGGGTCATGTTAACTGGTATCTTACTCGAGACGAGGAGACTAAAGTCAAGGATGTAGTACTTAAACTCAGTTTCGAAGACTTGCCTTCAAGATTAAAACCATGTTTTCTTTATCTAGGGATATTCCCCGAAGATTCTGAAATACATGTAAGACGATTGTTGCACCTATGGGTCGCTGAAGGATTTATACAAGAAACTGGTAGCAGAGATGCATATGATGTTGCTGAAGACTACTTGTATGAGCTCATTGATCGTAGTTTGATCCAAGTAGCACGAGTGGAAGATGTCAAAGGTGTGCAAACATGTCGCATCCATGATCTTCTTAGAGATCTCTGCATATTAGAGAGCAAAGAGGACAAGATCTTCGAAGTTTGTACGGAAACCAATATTTTAATCCGGTCAAAACCTCGTAGATTGTCTGTTCATTCTACAATTTCTCACTATGTTTCTTCAAGCACCAAAGACCATTCATGTGTCCGCTCTTTGTTTGTCTCTGATCAGAACTACTTGGTTGAAAACGACGAGTGGAAATGGCTTACCAAAGACTTCAAATTGGTTCGGGTGTTGGATTTGGGTCTTGGGAGTAGTAAGATTCCTTCCAATTTGGGTAACTTTATTCACTTGAGGTACTTAAGAATAGGCCCAGAAGGTATTTGCAGCGTTCCAGATTCTATATGCAACCTTCAAAATCTACAAACATTATGCTTTGAACGGTCAAGCCTGTTCTACTTTGATGGAAACCCAATTTCATTTCCATATGGAATAAAAAAGCTCAAGCATCTAACACATGTGTATTCTAATAGGCGTATCGTGCTACGCGGCAGCAGTTCCAAATTAGATGGTGAAGTTATGTGGCGCCTTCAAACAATCGGTTTCATTGCACTTGATAAGAAAACAACATATCTCATAGAGAAAGGAAGTTTCCCCAAATTAAGAACAATACGAGTGCAGATCTTCAAAGTTGATGTGCCTACAATGTTGTTATGCCTGCAAAAATTGATGCATTTGAATGAGCTAGAAATCAAATTTGCTGTGTTCTTAGTAAGGATCGATCGTAATCTGGAGGAAGTGCTACAAAGTTTGAAACACTTAACACATCTGAGTATTCTAAATATCACTTACCTCCCCAACCTTGTAACACATGTGACCATGTTTCCTCCCAACATTACCAAGTTAGCATTGGTATGTATTGACCGCTTGAATGATGACGGGATGAAAGTTATTGGAAGTCTCGCCAAACTCCAAATTTTTATCTTAAGTGGATCATTTGACGGCAATTTTGACTTGGCCCCATGTTTTGATCTTAATTTTGCTCAAGATGGGTTCCCACAGTTGCAGGAGTTTCAAATGGCAGATTTTCTAATTAGAAACTGGAAATTAGCCAATGGTTCGATGTCACGCCTTCAAATTCTCACTGTAGACAACTGTCCTGTGTTGGACAGCCTCCCAAGTGAACTGTGGTCTTTGACTACCTTAAGAAAAGTCTGTGTTCGAAAACCCTCCGATGCAATGGCTGCAATGTTACAAAATTTGGAAGTTAATAATGAATGTGAGCTCATTGTAGAATAA 2796 0.3963 MVDSVVSSLLGHLSQLLQHEANLLFGVEDKIKSLQNELEIINAYLKTSSKGNKNNNNKEIEKTVRRLIREEAHQAEDVIDTFIANVVIYKRRNVVGRMFYSIAHAKLRRNVAEKIDKIKTTLKEIHEHNIKYNQESSNQSTSATEEEERKRSLQRLRRNVEEENVVGFVHESEAVINRLIEGHPLHLNVISIIGMGGLGKTTLARKVYNSDKVKKHFNCHAWVSVSNECRTRELLLGLLQKLMPKHDYESRNGNKIKKKGKKKHNEAVSNSQGFSSLSDDELKKRVWEFLKLKKYLLILDDMWKIQDWDEIKDAFPDENKGSRILITSRLKEVALHTGRDPPYYLQFLNEEQSWELFYKKVFRGEEYPCDLESLGKEIVKSCGGLPLSIVVLAGLLANKEKSHREWSKVLGHVNWYLTRDEETKVKDVVLKLSFEDLPSRLKPCFLYLGIFPEDSEIHVRRLLHLWVAEGFIQETGSRDAYDVAEDYLYELIDRSLIQVARVEDVKGVQTCRIHDLLRDLCILESKEDKIFEVCTETNILIRSKPRRLSVHSTISHYVSSSTKDHSCVRSLFVSDQNYLVENDEWKWLTKDFKLVRVLDLGLGSSKIPSNLGNFIHLRYLRIGPEGICSVPDSICNLQNLQTLCFERSSLFYFDGNPISFPYGIKKLKHLTHVYSNRRIVLRGSSSKLDGEVMWRLQTIGFIALDKKTTYLIEKGSFPKLRTIRVQIFKVDVPTMLLCLQKLMHLNELEIKFAVFLVRIDRNLEEVLQSLKHLTHLSILNITYLPNLVTHVTMFPPNITKLALVCIDRLNDDGMKVIGSLAKLQIFILSGSFDGNFDLAPCFDLNFAQDGFPQLQEFQMADFLIRNWKLANGSMSRLQILTVDNCPVLDSLPSELWSLTTLRKVCVRKPSDAMAAMLQNLEVNNECELIVE* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1287 931 PANTHER DISEASE RESISTANCE PROTEIN RP 55 929 IPR044974 GO:0006952
Tpr5g1287 931 PANTHER - 55 929 - -
Tpr5g1287 931 CDD RX-CC_like 3 125 IPR038005 -
Tpr5g1287 931 Pfam Rx N-terminal domain 5 86 IPR041118 -
Tpr5g1287 931 Gene3D Ribonuclease Inhibitor 533 928 IPR032675 -
Tpr5g1287 931 Coils Coil 143 163 - -
Tpr5g1287 931 Pfam NB-ARC domain 173 435 IPR002182 GO:0043531
Tpr5g1287 931 Gene3D - 157 339 IPR027417 -
Tpr5g1287 931 Gene3D - 5 104 - -
Tpr5g1287 931 Gene3D - 347 433 IPR042197 -
Tpr5g1287 931 SUPERFAMILY L domain-like 512 906 - -
Tpr5g1287 931 Coils Coil 50 70 - -
Tpr5g1287 931 MobiDBLite consensus disorder prediction 251 271 - -
Tpr5g1287 931 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 448 IPR027417 -
Tpr5g1287 931 MobiDBLite consensus disorder prediction 129 150 - -
Tpr5g1287 931 Gene3D - 434 523 IPR036388 -
Tpr5g1287 931 PRINTS Disease resistance protein signature 189 204 - -
Tpr5g1287 931 PRINTS Disease resistance protein signature 382 396 - -
Tpr5g1287 931 PRINTS Disease resistance protein signature 872 888 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1287 Tpr-Chr5 25307181 25310397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1287 176 520 WRKY Transcription Factor Family AT5G45050 22.029 2.17e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1287 - - gmx:100814688 979.548