Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1285 ATGAACTCAATTATGGACACAAGGAGAGAAATTGTAGAGGTTAATTCAAGTGGGGTTCGTGATACAATTTATGTTGCTGTGGCTAAAGATGTTAAAGATAGCAAATTAAATGTGATATGGGCAATACAAAATTCTGGAGGGAAGAATATTTGTATTCTTCATGTTCATGTCCCAGCGCCTAAGATCCCCATGATGGGAGGTAAATTTCCAGCAAATGCATTGACAAGGCAAGAAGTTAAAGCATACAGGGAAATTGAAAGTCAAGACATGCATAAGACTCTAGATTCTTATCTTCTTATCTGTCAAAGAATGGGGGTGAGGGCAAATAAATTGCACATTGAAATGGATTGCATTGAAAAAGGGATTATAGAGCTTATATCCCAACATAACATACAAAACCTTGTAATGGGAGCAGCTTCTGATAAGTACCACTCTAGGAGAATGACAAGTCTAAGATCTAAGAAAGCCATCTATGTATGTGAAAAAGCTCCAGCTTCTTGTCTTATACAGTTTATCTGCAAAGGTTATCTTATACAGACAAGGGATTGCAGTATGGATAAACTTAGAGTAGAGGGCACATCTCCTTTGGCAAAGCAAATGCAAAACTCTGAAGTTGGTCACTCACCTCACTTAAGATCTAAATCAATTTCACATGATCAAGAATTACTTCATCATAGAGTAAGATCTATGAGCTCAGTATCTGAAAGTGGAAGGAGCATAGCATCATCTGTTTCTTCTTCAGAATGGTTTTCAACTCCACAAAGCAAGTTTGATAACGAACCAAGTTATAGTCCTTCACCTTCATCAGTTGAAACTGCGGCATCGAACACAAATTTGATTAGTGATGGCAGTGAGAATGTGTTGGACTTGAAGAGTTACCTGTCTAGTATCAAAGAGGAGGATCTTTATCATGCATCACCTCCTAGTGTGCTGCAGGATGGAAGAAGGGATGATAGTGTGTATGACCAACTTGAACAAGCTATGGCTGAGGCTGAGAAAGCTAGGTGGGATGCTTATCAGGAAACTGTTAGGCGTCGAAAAGCTGAAAAAGATGTCTTGGATGTGATACGCAAGAATAAAGACACCAAAATCTTGTACGAAGAAGAGGTGAAACTACGGAAATACTTAGAAGAGGCGCTAGAGAAAGCAAAAGAAGAAATTGATAACATGAGAAGCCAAATCGAAAAAGTCAATAAGGAACTCGAACTTGCCTTGGATCACAAGTCATCAACAGAGAATCAAATTGGTGAAGCCTCAAGAACACAATCTCTTCAACTTTTGTCAGAGTTTTCTTTTTCAGAGATTGAAGAAGCAACATGTAACTTCAATCCATCGTTAAAGATTGGTGAAGGCGGATACGGAAGTATATTTAAAGGCATCCTTCGTCACACCGAAGTGGCTATAAAAATGTTGAACCCTAACAGCACTCAAGGACCCTCGGAGTTTCAACAAGAGGTTACGGTATTGAGCAAGTTAAGGCATCGAAATCTTGTCACACTTATAGGAGCAAACCAAGAAACAAGGACTCTTATCTATGAATATTTACCAAATGGAAGCCTCGAGGATCATCTCATCTGCAACGACAGTAATACCTCGCCATTATCATGGCAGGCTCGAATTCGCATTGCGACAGAACTATGTTCTGCTCTAATTTTTCTCCATTCCAATAAACCTCACAGCATAGTGCATGGTGATTTAAAACCTTCCAACATTCTTCTCGATGTAAACTTCGTAAGCAAACTTAGCGACTTTGGAATTTGTCGTATATTATCGTGTCAAGATGATTCTTCAAGTAACAACAGTAGTACACAGTTTTGGATCACTAAATTTGCAAAGGGGACTTTTGCATACATGGATCCTGAATTCTTCGGTACAGGTGAACTTACTACAAAATCAGATGTTTATTCATTTGGAATTGTGTTATTGAGATTAATAACTGGAAAACTAGCATTAGGGATAAAGAATGAAGTGTTATATGCATTAAATAATGCCGGTGGAGAATTGAAATCACTTTTGGATCCTTTGGCCGGAGATTGGCCTATTGCAGAAGCCGAAAATTTGATTCATTTGGCTTTGAGGTGTTGTGATATGAATAAAAGGAGAAGGCCAGAACTTTGTTCAGATGTGTGGAAAGTGTTGGAACCAATGAGAGCTTCTTGTAGTGGCGCAATCACGAACACTTTTGGTCTTATGTCCTGTTTGGATAAACAACTTAATCGAACGACTTAA 2229 0.3863 MNSIMDTRREIVEVNSSGVRDTIYVAVAKDVKDSKLNVIWAIQNSGGKNICILHVHVPAPKIPMMGGKFPANALTRQEVKAYREIESQDMHKTLDSYLLICQRMGVRANKLHIEMDCIEKGIIELISQHNIQNLVMGAASDKYHSRRMTSLRSKKAIYVCEKAPASCLIQFICKGYLIQTRDCSMDKLRVEGTSPLAKQMQNSEVGHSPHLRSKSISHDQELLHHRVRSMSSVSESGRSIASSVSSSEWFSTPQSKFDNEPSYSPSPSSVETAASNTNLISDGSENVLDLKSYLSSIKEEDLYHASPPSVLQDGRRDDSVYDQLEQAMAEAEKARWDAYQETVRRRKAEKDVLDVIRKNKDTKILYEEEVKLRKYLEEALEKAKEEIDNMRSQIEKVNKELELALDHKSSTENQIGEASRTQSLQLLSEFSFSEIEEATCNFNPSLKIGEGGYGSIFKGILRHTEVAIKMLNPNSTQGPSEFQQEVTVLSKLRHRNLVTLIGANQETRTLIYEYLPNGSLEDHLICNDSNTSPLSWQARIRIATELCSALIFLHSNKPHSIVHGDLKPSNILLDVNFVSKLSDFGICRILSCQDDSSSNNSSTQFWITKFAKGTFAYMDPEFFGTGELTTKSDVYSFGIVLLRLITGKLALGIKNEVLYALNNAGGELKSLLDPLAGDWPIAEAENLIHLALRCCDMNKRRRPELCSDVWKVLEPMRASCSGAITNTFGLMSCLDKQLNRTT* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1285 742 Pfam Protein kinase domain 446 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1285 742 PANTHER OS02G0152300 PROTEIN 14 402 - -
Tpr5g1285 742 PANTHER OS02G0152300 PROTEIN 413 723 - -
Tpr5g1285 742 Gene3D Transferase(Phosphotransferase) domain 1 515 722 - -
Tpr5g1285 742 CDD STK_N 22 175 - -
Tpr5g1285 742 ProSitePatterns Protein kinases ATP-binding region signature. 448 469 IPR017441 GO:0005524
Tpr5g1285 742 ProSiteProfiles Protein kinase domain profile. 442 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1285 742 SMART serkin_6 442 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1285 742 SUPERFAMILY Protein kinase-like (PK-like) 423 714 IPR011009 -
Tpr5g1285 742 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 39 148 - -
Tpr5g1285 742 Coils Coil 321 341 - -
Tpr5g1285 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Tpr5g1285 742 PANTHER U-BOX KINASE FAMILY PROTEIN 14 402 - -
Tpr5g1285 742 PANTHER U-BOX KINASE FAMILY PROTEIN 413 723 - -
Tpr5g1285 742 Coils Coil 366 414 - -
Tpr5g1285 742 Gene3D Phosphorylase Kinase; domain 1 412 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1285 Tpr-Chr5 25287078 25294627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1285 19 729 U-box Gene Family AT2G45910 46.509 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr5g1285 Pkinase 2.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1285 - - mtr:MTR_8g030690 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1285 5 25287078 25294627 Tpr5g1285 5 25287078 25294627 ECH
Tpr5g1285 5 25287078 25294627 Tpr6g1656 6 17836926 17843180 ECH
Tpr6g1989 6 21561519 21567778 Tpr5g1285 5 25287078 25294627 PCT