Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1273 ATGCAATGCATTCCTCGCTCGCTCACACCACAACACAACCAATTCCATCTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACACAACCAATTCTACTTTTCCGAAAACATCGTTTGATTATGGAGGACAGTTCTTATGATGCTGATTGTGATTTCGTTGCTGCTGCTCAAGATTTGGAAGAGGACGACGCCCATGTCGACGAGGGCATAAGCTTAGGGGCTCCTGAGAAGTTTAATGTAGGTCGATTCTATGAAATTGACCATTCCAACCTTCCACCTGATTGTCCTGTTGAAGTAAAATGTGTGAACATTGTAATGGTCAGTGGCACAGGGGAGGGACAAGTATATCTGAGGTATCCAAGCCTCGACTCTCTTTGCACGCACTTCAACGACCAAAGCTTTTGGAAGAAAATCCCTGAACTTGATGAGAAGTATGTGATCAGAGTCGAATTCGCCATCAAAACACTTTGCAGGAGCATCACATACGAGGAATTTACTCAAAGAAGAAACTCATGGAGCTTCTGGGCCTCTCCTACTAAAGAAAACTTTCAAAACCATGACAGTCCAGTTCCAGTTATCAATGATGCAGCTACTAGTTTGGTTTCCAAGCAGGGTTCATGTTGGTCTGAACTCAAGTTCACGGTGGGTATGGTGCAGTGGGGCCAACGCCGGCAAGTTCGGTTCTTTGGCCGTTGTGAGGAGAAAAAGGTTGAATCTTTGCGTAAACTTCATAAGGAAAAAGGAGTTACTTTTGCACCCAGGGAATGGACTAATAAGAAGAAAAGAACGATTGTTGAAGAAGAAATGGAGGCTGTAAAGGTGGCTCCTTTTGGAGTACCGAGGATGACTCGTGAATGCAAGAAAAAACAAGGTGTGAGTTGTAGCAGTGGGGCTAAAAAGTCTACAAAAGCAGTAAACAACACCAAGGAGCAACAACTCGTCGTTTATGGCAAAAAGAAGCGAAAAATATCTATTGACAGATGGTCTGCTGAGAGGTATAAGCTGGCCGAGGAGAGCATATTGAATGTTTTGAAGGAAAAAGAAGCCGTGTATGGAAATCCAATAATGAGGCCAGACTTGAGATCAGAAGCACGAAAGTATATCGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCTGGAGGAGTTGAAAGATTTAGAAGGCGGCACAATGCGGAAGGCTTAATGGAGTACTGGTTAGAGAGTGCTGATCTTGCTGATATAAGAAAGGAAATAGGTGTCCAAGACCCTTACTGGACTCCTCCCCCTGGATGGAAGCCTGGCGACAGCATTTCACCAGATCATGTTACTAGTAATGAAATCAGAAAGATAAAGGAGGAAATAAATAAGCTGAAACGAGATATGCAGGTGCTTGCATCAAAGAAAGAAAAGGAAGCATTGGTCACTGTGGCTACTCCTAGTTCTTGTTTGTCAAGTTTGAATTGTAAGGACTATGGTTCTCAGGTTTCTAAGCAGGAGATTTATGTGGAGCTGGTTCATAAAAAGGCTAAAATTGAAGAACAACTACGAGAAATTTCTCTGGCTTTGAATGGCATGGAGGATCAACTGCGAAAGCTGAATGAACCAATAATGTCAGAATCATTGACACCACAAACGTTATTGCTAGGACCAACATCAATGACGGAAAACATTGTGGAGAAGACAAGGGAGAAGAAAAATTGGAACAATTACAAAGAAACAAAATCAGCAGACACACAAATGCTAGGAAGTAGAGCAGTAGAGGACAGGGCAACAAAGATAACAAGACTGAAAAGTGGTTTCCAAATTTGCAAACCAAGAGGGACCTTTAAGTGGCCAAATATGAGTATGTCTCCACGTGTTGTGGCCAACCTTGATGAACACACTTTGGTCCTAACCCCAGGCTCAGCTTCCTCTTCTACCACCGCACCTCCCAAGCTTATCTCCAAATCTCATACTCCTAACTTGCCATTGTCCCTACCATGCCCTTATTCTCCTGTTAAGCCACTGGCAGAGAGGCGCGCTGTGAGCAATACTACTTTGGCATGTGTCACAGGACCATTTTCCCCTCCATTAGAAACCCCAAAATCCACAAACACTACTACCATCACAAAAAGCAGTTCTTCTATTAACCTTAATGAGACTCCTCTGGACCAGGAGTGA 2169 0.4352 MQCIPRSLTPQHNQFHLHSLSLSLSLSLSTQPILLFRKHRLIMEDSSYDADCDFVAAAQDLEEDDAHVDEGISLGAPEKFNVGRFYEIDHSNLPPDCPVEVKCVNIVMVSGTGEGQVYLRYPSLDSLCTHFNDQSFWKKIPELDEKYVIRVEFAIKTLCRSITYEEFTQRRNSWSFWASPTKENFQNHDSPVPVINDAATSLVSKQGSCWSELKFTVGMVQWGQRRQVRFFGRCEEKKVESLRKLHKEKGVTFAPREWTNKKKRTIVEEEMEAVKVAPFGVPRMTRECKKKQGVSCSSGAKKSTKAVNNTKEQQLVVYGKKKRKISIDRWSAERYKLAEESILNVLKEKEAVYGNPIMRPDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGLMEYWLESADLADIRKEIGVQDPYWTPPPGWKPGDSISPDHVTSNEIRKIKEEINKLKRDMQVLASKKEKEALVTVATPSSCLSSLNCKDYGSQVSKQEIYVELVHKKAKIEEQLREISLALNGMEDQLRKLNEPIMSESLTPQTLLLGPTSMTENIVEKTREKKNWNNYKETKSADTQMLGSRAVEDRATKITRLKSGFQICKPRGTFKWPNMSMSPRVVANLDEHTLVLTPGSASSSTTAPPKLISKSHTPNLPLSLPCPYSPVKPLAERRAVSNTTLACVTGPFSPPLETPKSTNTTTITKSSSSINLNETPLDQE* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1273 722 MobiDBLite consensus disorder prediction 689 722 - -
Tpr5g1273 722 Coils Coil 450 470 - -
Tpr5g1273 722 Coils Coil 511 531 - -
Tpr5g1273 722 PANTHER PROTEIN DYAD 75 707 IPR044221 GO:0007131|GO:0051177|GO:0051321
Tpr5g1273 722 PANTHER PROTEIN DYAD 75 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1273 Tpr-Chr5 25095721 25100715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1273 321 410 PHD Transcription Factor Family AT5G22260 37.234 3.16e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1273 - - var:108339226 758.829