Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1238 ATGAAGAGAAAACATGAAGGATGCGCTGTGGGAATAGACCTTGGAACAACGTATTCGTGCGTTGCAGTGTGGCAAGAACAACACTGTCGAGTTGAGATAATTCACAATGATCAAGGGAACAAACTAACACCTTCTTGTGTTGCTTTCACTGAAGAACAAAGGTTGATTGGTGATGCTGCTAAGAATCAAGCTGCTGTCAATCCACAAAACACTATCTTTGATGCGAAGAGGTTAATTGGTAGGAAGTTTAGCGACCCTATTGTTCAAGATGATTTGTTGTTATGGCCCTTCAAGGTCACTGCTGGTGTCAATGACAAACCCATGATTACAGTCACATACAAGGGTCAGGAGAAGAAGCTTTGTGCAGAAGAAGTGTCGTCTATGGTACTCACTAAGATGCGAGAAATTGCTGAGGCATATTTAGAATCACCGGTTAAAAATGCAGTTGTTACCGTGCCAGCTTACTTTAGTGACTCTCAGAGAAAAGCCACTATAGATGCTGGTGCTATTGCTGGCCTAAATGTTTTGAGGGTAATGAATGAACCTACTGCCGCTGCTGTTGCTTATGGCCTTGACAAGAGAACAAACTGTGTTGAAGAGCGAAATATTTTTGTCTTTGATCTCGGTGGTGGGACTTTTGATGTGTCTCTACTAACGATTAAAGATAACAACTTCCGAGTTAAAGCAACTGCAGGAAACACTCACCTTGGTGGAGAGGACTTTGATAATAGAATGGTTAACTACTTTGTACAAGAGTTCAAGAGAAAGAACAAATTAGACATAAGTGGAAATGCAAAAGCGTTGAGGAGGTTGCGAATAGCTTGCGAGAGGGCTAAAAGATCACTTTCGTTCCTTGTTGTCTCCACAATTGAGTTAGATTCTCTATTTGAAGGCATAGATTTTTGTTCGTCGATCAATCGTGCCAAGTTTGAGGAAATTAATATGGATCTATTCAATGAATGTATGAAGTGCGTTGATAGTTGTCTTACAGATGCTAACATGGACAAGAGTAATGTAGATGATGTCGTCCTTGTTGGTGGGTCTTCTAGGATTCCTAAAGTGCAACAGCTATTACAGGACTTTTTTAAGGGGAAGGAGTTGTGCAAGAGCATTAACCCTGATGAGGCCGTAGCTTATGGGGCAGCTGTTCAGGCTGCTTTGTTGAGTGAAGATGTTAAGAATGTTCCTAAGTTGGTGCTGCAGGATGTTACACCTTTGTCTCTTGGTTTTTTTGCAGTAGGAGATATCATGAATGTGGTGATTCCTAGGAACACTTGCATTCCTGTCAAGAAGACCAAAGTATATGCTACAGCTCAAGATAACCAAACCAGTTCCTTGATTAAGGTTTATGAGGGTGAGAGAACAAGAGCCAGCGACAACAATTTGCTTGGTTCTTTTGTTCTTTCTGGTATTCCGCCAGCTCCCCGTGGCTCCTGTTCTTCAAATGTCTGTTTTTCTATTGATGAAAATGGTATTTTGACAGTTTCTTCAACAATTATCTCTTCTGGTAATTCGAATCAGATTACAATAACGAATTACAAAGAACGGTTGTCAGCTGAAGAAATTAAGAAATTAATTAAAGAAGCTGAGAATTACCGTATTGAAGATTACAAATTCCTAAGGAAGGCCAAAGCAGTCAATGCATTGGATTACTACATTTACAAAATGAAAAATGCTTTAAAGAATGAGGATGTTAATATAAAGCTCTCCTCAGAGGAAATTGAGAAGATTGAATCAGCAATTGCAGTGGCCACAAATTTGCTCAGTGACGATAACCAAAAGGTTGAAGTAGATGTTCTGGAGGATCATCTAAAAGGGCTTGAGAGTAGGATGGAACCAATTATAGCTAAGACTATTTAG 1860 0.3989 MKRKHEGCAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNKLTPSCVAFTEEQRLIGDAAKNQAAVNPQNTIFDAKRLIGRKFSDPIVQDDLLLWPFKVTAGVNDKPMITVTYKGQEKKLCAEEVSSMVLTKMREIAEAYLESPVKNAVVTVPAYFSDSQRKATIDAGAIAGLNVLRVMNEPTAAAVAYGLDKRTNCVEERNIFVFDLGGGTFDVSLLTIKDNNFRVKATAGNTHLGGEDFDNRMVNYFVQEFKRKNKLDISGNAKALRRLRIACERAKRSLSFLVVSTIELDSLFEGIDFCSSINRAKFEEINMDLFNECMKCVDSCLTDANMDKSNVDDVVLVGGSSRIPKVQQLLQDFFKGKELCKSINPDEAVAYGAAVQAALLSEDVKNVPKLVLQDVTPLSLGFFAVGDIMNVVIPRNTCIPVKKTKVYATAQDNQTSSLIKVYEGERTRASDNNLLGSFVLSGIPPAPRGSCSSNVCFSIDENGILTVSSTIISSGNSNQITITNYKERLSAEEIKKLIKEAENYRIEDYKFLRKAKAVNALDYYIYKMKNALKNEDVNIKLSSEEIEKIESAIAVATNLLSDDNQKVEVDVLEDHLKGLESRMEPIIAKTI* 620
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1238 619 Gene3D - 547 619 IPR029048 -
Tpr5g1238 619 Gene3D Actin; Chain A, domain 4 237 320 - -
Tpr5g1238 619 Pfam Hsp70 protein 9 617 IPR013126 GO:0005524|GO:0140662
Tpr5g1238 619 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 545 618 IPR029048 -
Tpr5g1238 619 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Tpr5g1238 619 Gene3D - 10 386 - -
Tpr5g1238 619 Gene3D - 194 368 - -
Tpr5g1238 619 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Tpr5g1238 619 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr5g1238 619 PRINTS 70kDa heat shock protein signature 38 50 - -
Tpr5g1238 619 PRINTS 70kDa heat shock protein signature 60 68 - -
Tpr5g1238 619 PRINTS 70kDa heat shock protein signature 148 168 - -
Tpr5g1238 619 PRINTS 70kDa heat shock protein signature 211 221 - -
Tpr5g1238 619 PRINTS 70kDa heat shock protein signature 339 355 - -
Tpr5g1238 619 PRINTS 70kDa heat shock protein signature 371 391 - -
Tpr5g1238 619 PRINTS 70kDa heat shock protein signature 397 416 - -
Tpr5g1238 619 PRINTS 70kDa heat shock protein signature 478 494 - -
Tpr5g1238 619 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 617 - -
Tpr5g1238 619 PANTHER HEAT SHOCK PROTEIN 70KDA 4 617 IPR013126 GO:0005524|GO:0140662
Tpr5g1238 619 Gene3D - 73 128 - -
Tpr5g1238 619 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 550 IPR029047 -
Tpr5g1238 619 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr5g1238 619 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Tpr5g1238 619 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 546 IPR029047 -
Tpr5g1238 619 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr5g1238 Tpr-Chr5 24605731 24608459 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1238 1 617 Calmodulin-binding Proteins AT3G12580 66.505 0.0 835
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1238 K03283 - gmx:102667578 921.768