Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g1238 | ATGAAGAGAAAACATGAAGGATGCGCTGTGGGAATAGACCTTGGAACAACGTATTCGTGCGTTGCAGTGTGGCAAGAACAACACTGTCGAGTTGAGATAATTCACAATGATCAAGGGAACAAACTAACACCTTCTTGTGTTGCTTTCACTGAAGAACAAAGGTTGATTGGTGATGCTGCTAAGAATCAAGCTGCTGTCAATCCACAAAACACTATCTTTGATGCGAAGAGGTTAATTGGTAGGAAGTTTAGCGACCCTATTGTTCAAGATGATTTGTTGTTATGGCCCTTCAAGGTCACTGCTGGTGTCAATGACAAACCCATGATTACAGTCACATACAAGGGTCAGGAGAAGAAGCTTTGTGCAGAAGAAGTGTCGTCTATGGTACTCACTAAGATGCGAGAAATTGCTGAGGCATATTTAGAATCACCGGTTAAAAATGCAGTTGTTACCGTGCCAGCTTACTTTAGTGACTCTCAGAGAAAAGCCACTATAGATGCTGGTGCTATTGCTGGCCTAAATGTTTTGAGGGTAATGAATGAACCTACTGCCGCTGCTGTTGCTTATGGCCTTGACAAGAGAACAAACTGTGTTGAAGAGCGAAATATTTTTGTCTTTGATCTCGGTGGTGGGACTTTTGATGTGTCTCTACTAACGATTAAAGATAACAACTTCCGAGTTAAAGCAACTGCAGGAAACACTCACCTTGGTGGAGAGGACTTTGATAATAGAATGGTTAACTACTTTGTACAAGAGTTCAAGAGAAAGAACAAATTAGACATAAGTGGAAATGCAAAAGCGTTGAGGAGGTTGCGAATAGCTTGCGAGAGGGCTAAAAGATCACTTTCGTTCCTTGTTGTCTCCACAATTGAGTTAGATTCTCTATTTGAAGGCATAGATTTTTGTTCGTCGATCAATCGTGCCAAGTTTGAGGAAATTAATATGGATCTATTCAATGAATGTATGAAGTGCGTTGATAGTTGTCTTACAGATGCTAACATGGACAAGAGTAATGTAGATGATGTCGTCCTTGTTGGTGGGTCTTCTAGGATTCCTAAAGTGCAACAGCTATTACAGGACTTTTTTAAGGGGAAGGAGTTGTGCAAGAGCATTAACCCTGATGAGGCCGTAGCTTATGGGGCAGCTGTTCAGGCTGCTTTGTTGAGTGAAGATGTTAAGAATGTTCCTAAGTTGGTGCTGCAGGATGTTACACCTTTGTCTCTTGGTTTTTTTGCAGTAGGAGATATCATGAATGTGGTGATTCCTAGGAACACTTGCATTCCTGTCAAGAAGACCAAAGTATATGCTACAGCTCAAGATAACCAAACCAGTTCCTTGATTAAGGTTTATGAGGGTGAGAGAACAAGAGCCAGCGACAACAATTTGCTTGGTTCTTTTGTTCTTTCTGGTATTCCGCCAGCTCCCCGTGGCTCCTGTTCTTCAAATGTCTGTTTTTCTATTGATGAAAATGGTATTTTGACAGTTTCTTCAACAATTATCTCTTCTGGTAATTCGAATCAGATTACAATAACGAATTACAAAGAACGGTTGTCAGCTGAAGAAATTAAGAAATTAATTAAAGAAGCTGAGAATTACCGTATTGAAGATTACAAATTCCTAAGGAAGGCCAAAGCAGTCAATGCATTGGATTACTACATTTACAAAATGAAAAATGCTTTAAAGAATGAGGATGTTAATATAAAGCTCTCCTCAGAGGAAATTGAGAAGATTGAATCAGCAATTGCAGTGGCCACAAATTTGCTCAGTGACGATAACCAAAAGGTTGAAGTAGATGTTCTGGAGGATCATCTAAAAGGGCTTGAGAGTAGGATGGAACCAATTATAGCTAAGACTATTTAG | 1860 | 0.3989 | MKRKHEGCAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNKLTPSCVAFTEEQRLIGDAAKNQAAVNPQNTIFDAKRLIGRKFSDPIVQDDLLLWPFKVTAGVNDKPMITVTYKGQEKKLCAEEVSSMVLTKMREIAEAYLESPVKNAVVTVPAYFSDSQRKATIDAGAIAGLNVLRVMNEPTAAAVAYGLDKRTNCVEERNIFVFDLGGGTFDVSLLTIKDNNFRVKATAGNTHLGGEDFDNRMVNYFVQEFKRKNKLDISGNAKALRRLRIACERAKRSLSFLVVSTIELDSLFEGIDFCSSINRAKFEEINMDLFNECMKCVDSCLTDANMDKSNVDDVVLVGGSSRIPKVQQLLQDFFKGKELCKSINPDEAVAYGAAVQAALLSEDVKNVPKLVLQDVTPLSLGFFAVGDIMNVVIPRNTCIPVKKTKVYATAQDNQTSSLIKVYEGERTRASDNNLLGSFVLSGIPPAPRGSCSSNVCFSIDENGILTVSSTIISSGNSNQITITNYKERLSAEEIKKLIKEAENYRIEDYKFLRKAKAVNALDYYIYKMKNALKNEDVNIKLSSEEIEKIESAIAVATNLLSDDNQKVEVDVLEDHLKGLESRMEPIIAKTI* | 620 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g1238 | 619 | Gene3D | - | 547 | 619 | IPR029048 | - | |
Tpr5g1238 | 619 | Gene3D | Actin; Chain A, domain 4 | 237 | 320 | - | - | |
Tpr5g1238 | 619 | Pfam | Hsp70 protein | 9 | 617 | IPR013126 | GO:0005524|GO:0140662 | |
Tpr5g1238 | 619 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 545 | 618 | IPR029048 | - | |
Tpr5g1238 | 619 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 342 | 356 | IPR018181 | - | |
Tpr5g1238 | 619 | Gene3D | - | 10 | 386 | - | - | |
Tpr5g1238 | 619 | Gene3D | - | 194 | 368 | - | - | |
Tpr5g1238 | 619 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 205 | 218 | IPR018181 | - | |
Tpr5g1238 | 619 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Tpr5g1238 | 619 | PRINTS | 70kDa heat shock protein signature | 38 | 50 | - | - | |
Tpr5g1238 | 619 | PRINTS | 70kDa heat shock protein signature | 60 | 68 | - | - | |
Tpr5g1238 | 619 | PRINTS | 70kDa heat shock protein signature | 148 | 168 | - | - | |
Tpr5g1238 | 619 | PRINTS | 70kDa heat shock protein signature | 211 | 221 | - | - | |
Tpr5g1238 | 619 | PRINTS | 70kDa heat shock protein signature | 339 | 355 | - | - | |
Tpr5g1238 | 619 | PRINTS | 70kDa heat shock protein signature | 371 | 391 | - | - | |
Tpr5g1238 | 619 | PRINTS | 70kDa heat shock protein signature | 397 | 416 | - | - | |
Tpr5g1238 | 619 | PRINTS | 70kDa heat shock protein signature | 478 | 494 | - | - | |
Tpr5g1238 | 619 | PANTHER | HEAT SHOCK 70 KDA PROTEIN | 4 | 617 | - | - | |
Tpr5g1238 | 619 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 4 | 617 | IPR013126 | GO:0005524|GO:0140662 | |
Tpr5g1238 | 619 | Gene3D | - | 73 | 128 | - | - | |
Tpr5g1238 | 619 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 394 | 550 | IPR029047 | - | |
Tpr5g1238 | 619 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Tpr5g1238 | 619 | SUPERFAMILY | Actin-like ATPase domain | 9 | 193 | IPR043129 | - | |
Tpr5g1238 | 619 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 392 | 546 | IPR029047 | - | |
Tpr5g1238 | 619 | SUPERFAMILY | Actin-like ATPase domain | 200 | 388 | IPR043129 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g1238 | Tpr-Chr5 | 24605731 | 24608459 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g1238 | 1 | 617 | Calmodulin-binding Proteins | AT3G12580 | 66.505 | 0.0 | 835 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g1238 | K03283 | - | gmx:102667578 | 921.768 |