Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1236 ATGAAGAGAAAACATGAAGGATGCGCTGTGGGAATAGACCTTGGAACAACCTATTCGTGCGTTGCAGTGTGGCAAGAACAACACTGTCGAGTTGAGATAATTCACAATGATCAAGGGAACAAAATAACACCTTCTTGTGTTGCTTTCACTGAAGAACAAAGGTTGATTGGTGATGCTGCTAAGAATCAAGCTTCTGTCAACCCTCAAAACACCATATTTGATGCGAAGAGGTTAATTGGTAGGAAGTTTAGCGACCCTATTGTTCAAGATGATTTGTTGTTATGGCCCTTCAAGGTCACTGCTGGTGTCAATGACAAACCCATGATTACAGTCACATACAAGGGTCAGGAGAAGAAGCTTTGTGCAGAAGAAGTGTCGTCTATGGTACTCACTAAGATGCGAGAAATTGCTGAGGCATATTTAGAATCACCGGTTAAAAATGCAGTTGTTACCGTGCCAGCTTACTTTAGTGACTCTCAGAGAAAAGCCACTATAGATGCTGGTGCTATTGCTGGCCTAAATGTTTTGAGGGTAATGAATGAACCTACTGCCGCTGCTGTTGCTTATGGCCTTGACAAGAGAACAAACTGTGTTGAAAAGCGAAATATCTTTGTCTTTGATCTCGGTGGTGGGACTTTTGATGTGTCTCTACTAACGATTAAAGATAACAACTTCCGAGTTAAAGCAACTGCAGGAAACACTCACCTTGGTGGAGAGGACTTTGATAATAGAATGGTTAACTACTTTGTACAAGAGTTCAAGAGAAAGAACAAATTAGACATAAGTGGAAATGCAAAAGCGTTGAGGAGGTTGCGAATAGCTTGCGAGAGGGCTAAAAGATCACTTTCGTTCCTTGTTGTCTCCACAATTGAGTTAGATTCTCTATTTGAAGGCATAGATTTTTGTTCGTCGATCAATCGTGCCAAGTTTGAGGAAATTAATATGGATCTATTCAATGAATGTATGAAGTGCGTTGATAGTTGTCTTACAGATGCTAACATGGACAAGAGTAATGTAGATGATGTCGTCCTTGTTGGTGGGTCTTCTAGGATTCCTAAAGTACAACAGCTATTACAGGACTTTTTTAAGGGGAAGGAGTTGTGCAAGAGCATTAACCCTGATGAGGCCGTAGCTTATGGGGCAGCTGTTCAGGCTGCTTTGTTGAGTGAAGATGTTAAGAATGTTCCTAAGTTGGTGCTGCAGGATGTTACACCTTTGTCTCTAGGTAGGGAAACAATTGGAGATATCATGAGTGTGGTGATTCCTAGGAACACTTCCATTCCCGTCAAGAAGACCGGAACATTTTGTACAGTTGAAGATAACCAATCATATTCTTTGATCAAGGTTTATGAGGGTGAGAGGACAAGAGCTAGTGACAACAATTTGCTTGGTTCTTTTACTCTTTCTGGTCATACCCTGGCTCCTCGCGGCCACCCTTACGATGTTTGTTTCGCTATTGATGAAAATGGTGTTTTGACAGTTTCTGCTACTGAAAAATCCACCGGAAAAATGAATGAGATTACAATAACCAATTACAAAGAAAGGATGTCAGCTGAAGAAATAAAAAAGTTAATTAAAGAAGCTGAGAATTACCATATTGAAGACAAGAAATTCCTAAGGAAGGCCAAAGCAGTGAATGCATTGGATGAATACATTTACAAAATGAAAGATTCTTTAAAGAAAAAGGATAGTTTAAAGCTTTCATCACAAGAAATCAGGAAGATTGAATCTGCAATTGTTGCGGCCACAAATTTGTTTGATAACCAGAATGTTGAAATAGATGTTCTGGAGAATTATCTAATTGGGCTTAAGAGTAGGATGGACCACATTATTATGGCTATGGTTATAGATTGA 1854 0.3964 MKRKHEGCAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNKITPSCVAFTEEQRLIGDAAKNQASVNPQNTIFDAKRLIGRKFSDPIVQDDLLLWPFKVTAGVNDKPMITVTYKGQEKKLCAEEVSSMVLTKMREIAEAYLESPVKNAVVTVPAYFSDSQRKATIDAGAIAGLNVLRVMNEPTAAAVAYGLDKRTNCVEKRNIFVFDLGGGTFDVSLLTIKDNNFRVKATAGNTHLGGEDFDNRMVNYFVQEFKRKNKLDISGNAKALRRLRIACERAKRSLSFLVVSTIELDSLFEGIDFCSSINRAKFEEINMDLFNECMKCVDSCLTDANMDKSNVDDVVLVGGSSRIPKVQQLLQDFFKGKELCKSINPDEAVAYGAAVQAALLSEDVKNVPKLVLQDVTPLSLGRETIGDIMSVVIPRNTSIPVKKTGTFCTVEDNQSYSLIKVYEGERTRASDNNLLGSFTLSGHTLAPRGHPYDVCFAIDENGVLTVSATEKSTGKMNEITITNYKERMSAEEIKKLIKEAENYHIEDKKFLRKAKAVNALDEYIYKMKDSLKKKDSLKLSSQEIRKIESAIVAATNLFDNQNVEIDVLENYLIGLKSRMDHIIMAMVID* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1236 617 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Tpr5g1236 617 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Tpr5g1236 617 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 613 IPR029048 -
Tpr5g1236 617 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 386 569 IPR029047 -
Tpr5g1236 617 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 612 - -
Tpr5g1236 617 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Tpr5g1236 617 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Tpr5g1236 617 Pfam Hsp70 protein 9 606 IPR013126 GO:0005524|GO:0140662
Tpr5g1236 617 Gene3D - 194 368 - -
Tpr5g1236 617 PANTHER HEAT SHOCK PROTEIN 70KDA 4 612 IPR013126 GO:0005524|GO:0140662
Tpr5g1236 617 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr5g1236 617 PRINTS 70kDa heat shock protein signature 38 50 - -
Tpr5g1236 617 PRINTS 70kDa heat shock protein signature 60 68 - -
Tpr5g1236 617 PRINTS 70kDa heat shock protein signature 148 168 - -
Tpr5g1236 617 PRINTS 70kDa heat shock protein signature 211 221 - -
Tpr5g1236 617 PRINTS 70kDa heat shock protein signature 339 355 - -
Tpr5g1236 617 PRINTS 70kDa heat shock protein signature 371 391 - -
Tpr5g1236 617 PRINTS 70kDa heat shock protein signature 397 416 - -
Tpr5g1236 617 PRINTS 70kDa heat shock protein signature 477 493 - -
Tpr5g1236 617 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr5g1236 617 Gene3D - 10 385 - -
Tpr5g1236 617 Gene3D Actin; Chain A, domain 4 237 320 - -
Tpr5g1236 617 Gene3D - 73 128 - -
Tpr5g1236 617 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 549 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1236 Tpr-Chr5 24573914 24576183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1236 1 614 Calmodulin-binding Proteins AT3G12580 65.534 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1236 K03283 - gmx:102667578 896.345