Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1227 ATGTGCCTGGTACTAATAATCTATTTCCTTGTAGACTTTGTTCACACCATCTGTCATGCCCTCATGTATCGTGGTGCTTGCATTTTTTCGATACATATGTTGAAGCTAGATGTGAGAGAATTGGCGATTCAATTCGGTTGTGTTCGGATTATACCTTATGTTTGTGACCGTCTTAAGCTTGCTGATTTTACTCATCCGGTGTTTATGGTTGTTGCTTTTTATTTATGTGCAAAGAAACACAAGCTCAAAGTTGATAAGATTAAGCTAATTGAACTCTGTGGTACATCTGAAGCTGAATTTTCCAGTGTTTCTACTACTATGAAAGATTTGTGCCATGATGTTTTTGGGGTAGCTAAAGAAAAGAAAGATCCTAAAGAAGTTAAGACCAATAGAGGTATGTTCTTTCCTGCTTTTCCTGCTCTTTGTGCAGATTTGCTTGATGTCTTACCAAGCAAAAGAAAAGCTGAGGACGGTGGCTATTTGTCTGATGATGGAGCAGAGGGAACTTTAGATTGTAGGATATGA 525 0.381 MCLVLIIYFLVDFVHTICHALMYRGACIFSIHMLKLDVRELAIQFGCVRIIPYVCDRLKLADFTHPVFMVVAFYLCAKKHKLKVDKIKLIELCGTSEAEFSSVSTTMKDLCHDVFGVAKEKKDPKEVKTNRGMFFPAFPALCADLLDVLPSKRKAEDGGYLSDDGAEGTLDCRI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1227 174 Gene3D - 33 114 - -
Tpr5g1227 174 PANTHER BNAC05G50940D PROTEIN 34 166 - -
Tpr5g1227 174 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 34 166 IPR020529 GO:0005664|GO:0006260
Tpr5g1227 174 CDD Orc6_mid 35 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1227 Tpr-Chr5 24440501 24442336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1227 34 164 Core DNA Replication Machinery Family AT1G26840 56.463 5.84e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1227 K02608 - gmx:100777539 195.282