Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1226 ATGAAGTCTGCTTTAACAACACAGATAACAGAGGAGGCTGATATATCTGAAGTTATTGAGACTGTGAAGCTTCGGGTTAGAGATGCTAAGTTGCCAGAAACTGAGATTGTGCGGATCTTATGGGATGTTTTAATGGATGGTGTTCAGTGGTCTGGTAAAAATCAGCAACAGAATGCAAATGCTGCCCTGCGCAAGGTAAAAACTTGGGCAGAACTGTTGAATACTTTCTGCACCAGTGGAAAACTTGAGCTGGAACTGATGTACAAAGTACAGATGCAATGCTATGAGGATGCTAAACTGATGAAACTGTTCCCTGAGATTATTAGATCTCTCTATGACCAAGATGTGCTGGCTGAAGATACCATTCTTCATTGGTTCCGTAAAGGAACAAACCCCAAAGGAAGGCAAACCTTTGTGAAGGCACTGGAACCCTTTGTTAATTGGCTGAAAGAGGCTGAAGAAGAGGAGTGA 471 0.4246 MKSALTTQITEEADISEVIETVKLRVRDAKLPETEIVRILWDVLMDGVQWSGKNQQQNANAALRKVKTWAELLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILHWFRKGTNPKGRQTFVKALEPFVNWLKEAEEEE* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1226 156 Pfam eIF4-gamma/eIF5/eIF2-epsilon 83 156 IPR003307 GO:0005515
Tpr5g1226 156 SUPERFAMILY ARM repeat 6 153 IPR016024 -
Tpr5g1226 156 Gene3D - 1 152 - -
Tpr5g1226 156 ProSiteProfiles W2 domain profile. 1 156 IPR003307 GO:0005515
Tpr5g1226 156 PANTHER PROTEIN KRASAVIETZ 1 156 - -
Tpr5g1226 156 SMART 542_3 70 155 IPR003307 GO:0005515
Tpr5g1226 156 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1226 Tpr-Chr5 24437967 24440707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1226 45 152 Eukaryotic Initiation Factors Gene Family AT2G34970 33.636 7.52e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1226 - - gmx:100789838 298.901