Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1224 ATGACATATCCACAAACCCCCACTAGTTCAAATTCTTATCCCTTTTACACTTTTCCAGCTACACCACTCTTTCTTCTACTATTACAAACTTTCATCATGGTAGTAGTAGTAGTAACAAAAACAAAACATTGGTTTTCATCATCCAATCTTATTGTTCTTGTTCTCTTCATTTTCATCTTCCTCATGTCAAAACCATGTTTCTGTGGTGGAATTCAATATATCAGCAAAATCCCACCTGGTACTCAATGTTCTCCATTGGATTGGATTGACTTAAATGGAAAATTCCTCCTCTCAGAAAACCTAAATTTTTCTTGCGGTTTTACCTCCACCGCCAACGACGTAACCAAGCAACTATTAGTAATCGTCCATGTATCAAGCTCCACTGTGGTTTGGACTGCTAATAGAGCAAAACCTGTTTCTGATAATTTTGTCTTTGATAAAAAGGGTAATGCTTTTTTACAAAAAGATGGAATTTTGATCTGGTCTACAAACACTATTAACAAAGGGGTTTCTTCAATGGTGTTGCAGAATACTGGAAATTTGGTTTTACTTGGGAGTGATAATAGTACGGTAATTTGGCAAAGTTTTGATTTTCCTACTGATACTTTGTTGTCTGAACAGGTTTTCAAAGAGGGAATGAAACTTACTAGTGAACCTAATTCAAATAATCTGACCTATGTTCTTGAGATTAAATCTGGTAATGTTGTTCTTTCAGCTGGTTTCAAAATTCCACAGGTTTATTGGACTATGCAGAATGATAACCGTAAAATCATTGACAAGTATGGTCATGTTGTGGTTTCGGCGAATCTCAGTGATAATTCTTGGAGATTTTATAATGAGAAAAAGTCTTTGTTGTGGCAATTCGTTTTCTCTGATAGTGTAGGTTTGAATGCTATTTGGATTGCTGTTTTGGGAAGAGATGGTGTTATTACTTTCTCCAGGTTTAAAAGTGATGGATCAATCGGTTATTCTACGATAAGGATACCGCAAGATCCTTGTGCTACACCGGAGGCTTGTGATCCTTACTATATGTGCACAGGCAACCGTATGTGTAGTTGTCCTTTTGTTCTTCCTAGTTGTAAACCTGGTTTTGTTTCTGCTTGTGATGAAAAATCAGAAAAGTCTATTGAATTTCTGAAAGGTGATGATGGGCTTGATTACTTTGCACTTGATTTTCTTCAGCCCTTTTCAAAAACAAATTTGGTAGGTTGTCAAACGTCTTGCCGTGGAAATTGCTCTTGCCTTGCAATGTTCTTTCATAAAAGTTCAGGAAACTGTTTCCTGTTGGAAAGTGTAGGAAGTTTTCAGAAATCTGATGACGGCGATTCTGGTTATGTTTCTTACATTAAGGTCTCAAGCGATGGAATCACAAAAGGAAGTGGAAGCAGCAATAAACACATCATAGTTGTTGTAACTGTCATATTAACTTTGTTTGTAATTTCTCTTCTGCTTGGGGTTAGATACTACAGGAAGAAAACAAGGTTACCAGATTTTCCTAGAGAATCAGAGGAGGACCATTTCTTGGAGAATTTAACCGGTATTCCGATCCGTTACCGATACAAAGATCTCGAAGTTGCAACTAAAAACTTCTCAGAGAAGCTTGGCTCAGGAGGTTTTGGTTCAGTGTACAAAGGAGCTCTACCTGATGGAACTCAATTAGCTGTGAAGCAGCTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTCCGAGCTGAAGTTAGCATCATTGGAAGCATTCATCACCTTAATTTAGTAAGGCTCAAAGGTTTTTGTGCTGATGGAACACACAGGCTTCTAGTTTATGAGTTTATGGCTAATAACTCATTGGATAAATGGATATTCAAGAAGAAAAAAGGTGAATTTCTTTTGGATTGGGATACAAGGTTTAACATAGCAGTAGGAACAGCAAAAGGGCTAGCTTATTTACATGAAGAGTGTGACTCAAAGATTGTTCATTGTGACATCAAGCCTGAAAATGTACTCCTTGATGATCATTTCACAGCTAAAGTTTCAGATTTTGGTTTAGCCAAGCTCATGAATAGAGAACAAAGTCATGTTTTTACAACAATGAGAGGAACACGCGGCTACCTTGCACCTGAGTGGATAAAAAAATATGCAATATCAGAGAAAAGTGATGTATACAGCTATGGAATGGTGTTGCTGGAGATTATAGGAGGAAGGAATAATTATGATACTAATGAGAGTTCAGAGAAAAGATATTTTCCTAGTTATGCTTTTAAGATGATGGAAGAAGGGAAAATGAGAGATATACTTGATCCTGAGCTACAAATTGACGAGCATGATGATAGGGCTCAATGTGCTATAAGGGTTGCATTGTGGTGTATAAAAGAAGACATGTCTATGAGACCTTCAATGACTAAAGTTGTTCAAATGTTGGAAGGTCGTTGTGCTGTTCCTATACCTAGTGAAGGTGGTAACTCTTCTGGTCCATCAGATAGTAATAGTGAAGGTCTATCAGCAGTTCGTCTTTCTGGCCCAAGATAA 2502 0.3737 MTYPQTPTSSNSYPFYTFPATPLFLLLLQTFIMVVVVVTKTKHWFSSSNLIVLVLFIFIFLMSKPCFCGGIQYISKIPPGTQCSPLDWIDLNGKFLLSENLNFSCGFTSTANDVTKQLLVIVHVSSSTVVWTANRAKPVSDNFVFDKKGNAFLQKDGILIWSTNTINKGVSSMVLQNTGNLVLLGSDNSTVIWQSFDFPTDTLLSEQVFKEGMKLTSEPNSNNLTYVLEIKSGNVVLSAGFKIPQVYWTMQNDNRKIIDKYGHVVVSANLSDNSWRFYNEKKSLLWQFVFSDSVGLNAIWIAVLGRDGVITFSRFKSDGSIGYSTIRIPQDPCATPEACDPYYMCTGNRMCSCPFVLPSCKPGFVSACDEKSEKSIEFLKGDDGLDYFALDFLQPFSKTNLVGCQTSCRGNCSCLAMFFHKSSGNCFLLESVGSFQKSDDGDSGYVSYIKVSSDGITKGSGSSNKHIIVVVTVILTLFVISLLLGVRYYRKKTRLPDFPRESEEDHFLENLTGIPIRYRYKDLEVATKNFSEKLGSGGFGSVYKGALPDGTQLAVKQLEGIGQGKKEFRAEVSIIGSIHHLNLVRLKGFCADGTHRLLVYEFMANNSLDKWIFKKKKGEFLLDWDTRFNIAVGTAKGLAYLHEECDSKIVHCDIKPENVLLDDHFTAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWIKKYAISEKSDVYSYGMVLLEIIGGRNNYDTNESSEKRYFPSYAFKMMEEGKMRDILDPELQIDEHDDRAQCAIRVALWCIKEDMSMRPSMTKVVQMLEGRCAVPIPSEGGNSSGPSDSNSEGLSAVRLSGPR* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1224 833 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Tpr5g1224 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 121 251 IPR036426 -
Tpr5g1224 833 ProSiteProfiles Bulb-type lectin domain profile. 81 196 IPR001480 -
Tpr5g1224 833 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 51 809 - -
Tpr5g1224 833 CDD STKc_IRAK 534 800 - -
Tpr5g1224 833 MobiDBLite consensus disorder prediction 807 833 - -
Tpr5g1224 833 CDD PAN_AP_plant 380 452 - -
Tpr5g1224 833 Pfam Protein kinase domain 531 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1224 833 SMART serkin_6 528 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1224 833 Gene3D Phosphorylase Kinase; domain 1 499 602 - -
Tpr5g1224 833 PIRSF SRK 45 829 IPR024171 GO:0004674
Tpr5g1224 833 Gene3D - 89 197 IPR036426 -
Tpr5g1224 833 SUPERFAMILY Protein kinase-like (PK-like) 510 799 IPR011009 -
Tpr5g1224 833 MobiDBLite consensus disorder prediction 810 826 - -
Tpr5g1224 833 Gene3D Transferase(Phosphotransferase) domain 1 603 804 - -
Tpr5g1224 833 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 51 809 - -
Tpr5g1224 833 CDD B_lectin 89 199 IPR001480 -
Tpr5g1224 833 Pfam D-mannose binding lectin 128 209 IPR001480 -
Tpr5g1224 833 SMART blect_4 87 199 IPR001480 -
Tpr5g1224 833 ProSiteProfiles Protein kinase domain profile. 528 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1224 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1224 Tpr-Chr5 24355855 24358644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1224 466 807 Receptor kinase-like Gene Family AT5G20050 45.179 3.28e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr5g1224 Pkinase 2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1224 - - gmx:100791158 1122.84