Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1217 ATGGTAGTAGTAGTAGTAACAAGAACAAAACATTGGTTTTCATCATCCAATCTTATTGTTCTTGTTCTCTTCATTTTCATCTTCCTCATGTCAAAACCATGTTTCTGTGGTGGAATTCAATATATCAGCAAAATCCCACCTGGTACTCAATGTTCTCCATTGGATTGGATTGACTTAAATGGACAATTCCTCCTCTCAGAAAACCTAAATTTTTCTTGCGGTTTTACCATCCCCGCCAACGACGTAACCAAGCGACTATTAGTAATCGTCCATGTATCAAGCTCCACTGTGGTTTGGACTGCTAATAGAGCAAAACCTGTTTGTGATAATTTTGTCTTTGATAAAAAGGGTAATGCTTTTTTACAAAAAGATGGAATTTTGATCTGGTCTACAAACACTATTAACAAAGGGGTTTCTTCAATGGTGTTGCAGAATACTGGAAATTTGGTTTTACTTGGGAGTGATAATAGTACGGTAATTTGGCAAAGTTTTGATTTTCCTACTGATACTTTGTTGTCTGAACAGGTTTTCAAAGAGGGAATGAAACTTACTAGTGAACCTAATTCAAATAATCTGACCTATGTTCTTGAGATTAAATCTGGTAATGTTGTTCTTTCAGCTGGTTTCAAAATTCCACAGGTTTATTGGACTATGCAGAATGATAACCGTAAAATCATTGACAAGTATGGTCATGTTGTGGTTTCGGCGAATCTCAGTGATAATTCTTGGAGATTTTATAATGAGAAAAAGTCTTTGTTGTGGCAATTCGTTTTCTCTGATAGTGTAGGTTTGAATGCTATTTGGATTGCTGTTTTGGGAAGAGATGGTGTTATTACTTTCTCCAGGTTTAAAAGTGATGGATCAATCGGTTATTCTACGATAAGGATACCGCAAGATCCTTGTGCTACACCGGAGGCTTGTGATCCTTACTATATGTGCACAGGCAACCGTATGTGTAGTTGTCCTTTTGTTCTTCCTAGTTGTAAACCTGGTTTTGTTTCTGCTTGTGATGAAAAATCAGAAAAGTCTATTGAATTTCTGAAAGGTGATGATGGGCTTGATTACTTTGCACTTGATTTTCTTCAGCCCTTTTCAAAAACAAATTTGGTAGGTTGTCAAACGTCTTGCCGTGGAAATTGCTCTTGCCTTGCAATGTTCTTTCATAAAAGTTCAGGAAACTGTTTCCTGTTGGAAAGTGTAGGAAGTTTTCAGAAATCTGATGACGGCGATTCTGGTTATGTTTCTTACATTAAGGTCTCAAGCGATGGAATCACAAAAGGAAGTGGAAGCAGCAATAAACACATCATAGTTGTTGTTGTTGTTGTAACTGTCATATTAACTTTGTTTGTAATTTCTCTTCTGCTTGGGGTTAGATACTACAGGAAGAAAACAAGGTTACTAGATTTTCCTAGAGAATCAGAAGAGGACCATTTCTTGGAGAATTTAACCGGTATTCCGATCCGTTACCGATACAAAGATCTCGAAGTTGCAACTAAAAACTTCTCAGAGAAGCTTGGCTCAGGAGGTTTTGGTTCAGTGTACAAAGGGGCTCTACCTGATGGAACTCAATTAGCTGTGAAGCAGCTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTCCGAGCTGAAGTTAGCATCATTGGAAGCATTCATCACCTTAATTTAGTAAGGCTCAAAGGTTTTTGTGCTGATGGGACACACAGGCTTCTAGTTTATGAGTTTATGGCTAATAACTCATTGGATAAATGGATATTCAAGAAGAAAAAAGGTGAATTTCTTTTGGATTGGGATACAAGGTTTAACATAGCAGTAGGAACAGCAAAAGGGCTAGCTTATTTACATGAAGAGTGTGACTCAAAGATTGTTCATTGTGACATCAAACCTGAAAATGTACTCCTTGATGATCATTTCACAGCTAAAGTTTCAGATTTTGGTCTAGCCAAGCTCATGAATAGAGAACAAAGTCATGTTTTTACAACAATGAGAGGAACACGCGGCTACCTTGCACCTGAGTGGATAAAAAAATATGCAATATCAGAGAAAAGTGATGTATACAGCTATGGAATGGTGTTGTTGGAGATTATAGGAGGAAGGAATAATTATGATACTAATGAGAGTTCAGAGAAAAGATATTTTCCTAGTTATGCTTTTAAGATGATGGAAGAAGGGAAAATGAGAGATATCCTTGATCCTGAGCTACAAATTGACGAGCATGATGATAGGGCTCAATGTGCTATAAGGGTTGCATTGTGGTGTATAAAAGAAGACATGTCTATGAGACCTTCCATGACTAAAGTTGTTCAAATGTTGGAAGGTCGTTGCGCTGTTCCTATACCTAGTGAAGGTGGTAACTCTTCTGGTCCATCAGATAGTAATAGTGAAGGTCTATCAGCAGTTCGTCTTTCTGGCCCAAGATAA 2415 0.376 MVVVVVTRTKHWFSSSNLIVLVLFIFIFLMSKPCFCGGIQYISKIPPGTQCSPLDWIDLNGQFLLSENLNFSCGFTIPANDVTKRLLVIVHVSSSTVVWTANRAKPVCDNFVFDKKGNAFLQKDGILIWSTNTINKGVSSMVLQNTGNLVLLGSDNSTVIWQSFDFPTDTLLSEQVFKEGMKLTSEPNSNNLTYVLEIKSGNVVLSAGFKIPQVYWTMQNDNRKIIDKYGHVVVSANLSDNSWRFYNEKKSLLWQFVFSDSVGLNAIWIAVLGRDGVITFSRFKSDGSIGYSTIRIPQDPCATPEACDPYYMCTGNRMCSCPFVLPSCKPGFVSACDEKSEKSIEFLKGDDGLDYFALDFLQPFSKTNLVGCQTSCRGNCSCLAMFFHKSSGNCFLLESVGSFQKSDDGDSGYVSYIKVSSDGITKGSGSSNKHIIVVVVVVTVILTLFVISLLLGVRYYRKKTRLLDFPRESEEDHFLENLTGIPIRYRYKDLEVATKNFSEKLGSGGFGSVYKGALPDGTQLAVKQLEGIGQGKKEFRAEVSIIGSIHHLNLVRLKGFCADGTHRLLVYEFMANNSLDKWIFKKKKGEFLLDWDTRFNIAVGTAKGLAYLHEECDSKIVHCDIKPENVLLDDHFTAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWIKKYAISEKSDVYSYGMVLLEIIGGRNNYDTNESSEKRYFPSYAFKMMEEGKMRDILDPELQIDEHDDRAQCAIRVALWCIKEDMSMRPSMTKVVQMLEGRCAVPIPSEGGNSSGPSDSNSEGLSAVRLSGPR* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1217 804 Gene3D Transferase(Phosphotransferase) domain 1 574 775 - -
Tpr5g1217 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 19 780 - -
Tpr5g1217 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 219 IPR036426 -
Tpr5g1217 804 ProSiteProfiles Bulb-type lectin domain profile. 49 164 IPR001480 -
Tpr5g1217 804 CDD PAN_AP_plant 348 420 - -
Tpr5g1217 804 Gene3D - 59 165 IPR036426 -
Tpr5g1217 804 SMART serkin_6 499 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1217 804 SUPERFAMILY Protein kinase-like (PK-like) 482 770 IPR011009 -
Tpr5g1217 804 PIRSF SRK 14 800 IPR024171 GO:0004674
Tpr5g1217 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 19 780 - -
Tpr5g1217 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Tpr5g1217 804 Pfam D-mannose binding lectin 96 177 IPR001480 -
Tpr5g1217 804 Gene3D Phosphorylase Kinase; domain 1 468 573 - -
Tpr5g1217 804 MobiDBLite consensus disorder prediction 778 804 - -
Tpr5g1217 804 MobiDBLite consensus disorder prediction 781 797 - -
Tpr5g1217 804 CDD STKc_IRAK 505 771 - -
Tpr5g1217 804 Pfam Protein kinase domain 502 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1217 804 SMART blect_4 55 167 IPR001480 -
Tpr5g1217 804 CDD B_lectin 57 167 IPR001480 -
Tpr5g1217 804 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Tpr5g1217 804 ProSiteProfiles Protein kinase domain profile. 499 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1217 Tpr-Chr5 24197986 24200676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1217 442 780 Receptor kinase-like Gene Family AT5G20050 45.278 2.09e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr5g1217 Pkinase 1.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1217 - - gmx:100791158 1113.98