Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1205 ATGGTTTTGGAAACGGAAATCATCTATCAACAAAGCATGTTAGATGTGAAGTATCACCTTCGCGTTTCTCAAGAGAATGGTGTCAAGGTTGAGGTTTCACCTGCTTCTAATGTTGTTCCGATTTTTAGCCATGTTAGGGTTTCGTCTGAATCGATTTCAACCGAAACGTCTATTTTTGAATCGACTGTGAGTTGCTCAGAGATGATTACAGATTCTATTTTAGAGGATGCTGTTGCAAGGTTTAAACCAAATGTTCGTTCTGGTAGCTGTGCTGATATTGGACCGAGGGGATCAATGGATGATGAACACATTCAAATTGATGATCTAGCTGCCCACCTTGGATTTGTCTTTAATTACCCTACACCGAGTGCTTTTTATGCAGTCTTTGATGGGCATGGAGGGCCTGATGCAGCTGTGTTTGTTAAGAACAATGCTATGAAATTATTTTTTGAAGATACTACTATGCTGCAAACGTATGATACTGATGCACTTCTGCTGAAGAAGTTGGAAGCTTCTCATCGGAAAGCCTTTCTAGGCGCCGACCTTGCTTTGGCTGATGAACAGAGTGTCAGTAGTTCTTGTGGGACAACAGCACTGACTGCTCTTATACTCGGAAGGCATTTGATGGTTGCTAATGCCGGCGATTGTCGAGCTGTTCTTTGTAAGCGTGGAGTGGCTGTTAACATGTCTCAAGACCACAGACCAAGTTATCTACCAGAGCGCAAGAGAGTGGAAGAGTTGGGCGGTTATATTGATGACGGATATCTCAATGGTTATCTTTCTGTCACTCGTGCCCTTGGCGATTGGGACTTAAAATTACCACTTGGTTCTGCATCACCTCTTACTGCTGAACCAGATGTTCAGGTAGTCACACTGACTGAGGAAGACGAGTTCTTGATCATTGGCTGTGATGGCATTTGGGATGTAATGTCAAGCCAGGAGGCAGTTAGTCTTGTTCGTCGTGGATTACGAAGGCACGATGACCCACAACAATGTGCAAGAGAGCTAGTCAAAGAAGCATTGCGCCTCCACACAACAGATAATCTTACTGTTATTGTTATTTGTTTGTCTCCTGTCGAAACCATTGTTGAATCATGTCCACCCCAGAGACGAAGATTCAGAGCCTGCTCTCTGTCTGAAGAAGCTCGGAACAAATTGAGGAGCTTGCTTGAAAGTAACTGA 1182 0.4374 MVLETEIIYQQSMLDVKYHLRVSQENGVKVEVSPASNVVPIFSHVRVSSESISTETSIFESTVSCSEMITDSILEDAVARFKPNVRSGSCADIGPRGSMDDEHIQIDDLAAHLGFVFNYPTPSAFYAVFDGHGGPDAAVFVKNNAMKLFFEDTTMLQTYDTDALLLKKLEASHRKAFLGADLALADEQSVSSSCGTTALTALILGRHLMVANAGDCRAVLCKRGVAVNMSQDHRPSYLPERKRVEELGGYIDDGYLNGYLSVTRALGDWDLKLPLGSASPLTAEPDVQVVTLTEEDEFLIIGCDGIWDVMSSQEAVSLVRRGLRRHDDPQQCARELVKEALRLHTTDNLTVIVICLSPVETIVESCPPQRRRFRACSLSEEARNKLRSLLESN* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1205 393 ProSiteProfiles PPM-type phosphatase domain profile. 86 356 IPR001932 -
Tpr5g1205 393 ProSitePatterns PPM-type phosphatase domain signature. 125 133 IPR000222 GO:0043169
Tpr5g1205 393 PANTHER PROTEIN PHOSPHATASE 2C 1 380 IPR015655 GO:0004722|GO:0006470
Tpr5g1205 393 SMART PP2C_4 76 354 IPR001932 -
Tpr5g1205 393 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 380 - -
Tpr5g1205 393 SUPERFAMILY PP2C-like 80 358 IPR036457 -
Tpr5g1205 393 SMART PP2C_SIG_2 101 356 IPR001932 -
Tpr5g1205 393 Pfam Protein phosphatase 2C 94 348 IPR001932 -
Tpr5g1205 393 Gene3D - 72 360 IPR036457 -
Tpr5g1205 393 CDD PP2Cc 85 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1205 Tpr-Chr5 23818541 23821076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1205 1 390 PP2C-type Phosphatase Gene Family AT1G48040 57.107 2.86e-145 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1205 K14803 - gmx:100798957 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1205 5 23818541 23821076 Tpr5g1205 5 23818541 23821076 ECH