Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1168 ATGATGAAGGAATGTGATTTTCACTACGCTGCGACTGTAATGCATAAACCTAAGAAACGGTTAAGGGAATTCGGTGACGCCGCTGATTCTCACTGTTACTCACTCGCTGATCAATGTGGTTTGCGTCTTCGCCGTCGGATCAACGGTGACTGGGTCCCACCTCTCCTTCCACCACAGGAAAAACCACCTGAGATGAAGAAAAAGATTAAGCTCATAATCAAATTCACGGGGAAGTCAAAAAACGAGTCCAAATTTAAAAAGGGGGAAACAGTGGAAGTTAGCGACGGCAATGAAGGTTATAAAGGTGCTTGGTTTGTGGCTACTGTTATTGACACATTAGAAAAAGAAAGGTTTCTAGTTGAATACAAAGATTTGGTGACAAATGATGATGGTACTCGACCCCTGAAAGAAGAAATTGATGCTAAGTTTATTAGGCCTTCTCCTCCTTATGTTCCAAATTTTGGTTCTTTCAAAAAGTTACAAGAAGTGGATGCATGGTACAATGATGCTTGGTGGGAAGGTGTGGTTGTTGAATTAGTGAACACGACAGAGTGTTCTGTTCATTTTATGAACAATGAAGTGTTGAAAATTGAATGTTCGAAGCTAAGACCTCATCAAGATTGGATTAATGGAAAATGGATCATGTCTTCTAAGGAGCCGAGTGAGCTAGTGAAGAAGTTTGGAGATGTGATGCCAAAAGCCAACAATCTTGCCGGAACAAAGTTGATTTTGAAATATCCGATTCCTTGTGAGAATGCAAAGCAACCTACAGCTGTAATAACAAGGACACTATACACTGGAAGCAAATTTGATTTACATTTCTACAAAGGGGAAAAGGTAGAAATTCGAAGTGATGAAAAAGGCTATGAAGGTTCATGGTATACAGCAACTGTTGTCGATTTCTTCAATAATGGAAAGTACTTGGTGGAGTATTCGACACTGAAAACAGATGACTTAACAGAACCACTGAAAGAAGAAATAAATGTTTCAGATATTAGACCGTGTCCGCCTGAAGTTGATCGTTTTTGTCGATATGTGACATGCCAAAGGGTTGATGTTTGGTTTAATGATGGATGGTGGGAAGGTGTAGTATCTAATGTTGCTCATGGTTTCAATGGTTTCGAGTATAAGGTTTATTTTTGGACTTCGAATGAGGAGCTGGAATTTGAACACTGTTATCTTAGGCCTCATCAAGATTGGATTGATGGAAGATGGATGCTTGCTTCTTTTGTATGA 1236 0.3956 MMKECDFHYAATVMHKPKKRLREFGDAADSHCYSLADQCGLRLRRRINGDWVPPLLPPQEKPPEMKKKIKLIIKFTGKSKNESKFKKGETVEVSDGNEGYKGAWFVATVIDTLEKERFLVEYKDLVTNDDGTRPLKEEIDAKFIRPSPPYVPNFGSFKKLQEVDAWYNDAWWEGVVVELVNTTECSVHFMNNEVLKIECSKLRPHQDWINGKWIMSSKEPSELVKKFGDVMPKANNLAGTKLILKYPIPCENAKQPTAVITRTLYTGSKFDLHFYKGEKVEIRSDEKGYEGSWYTATVVDFFNNGKYLVEYSTLKTDDLTEPLKEEINVSDIRPCPPEVDRFCRYVTCQRVDVWFNDGWWEGVVSNVAHGFNGFEYKVYFWTSNEELEFEHCYLRPHQDWIDGRWMLASFV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1168 411 Pfam Agenet domain 88 149 IPR008395 -
Tpr5g1168 411 Pfam Agenet domain 277 337 IPR008395 -
Tpr5g1168 411 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 23 411 - -
Tpr5g1168 411 SMART agenet_At_2 343 402 IPR014002 -
Tpr5g1168 411 SMART agenet_At_2 83 152 IPR014002 -
Tpr5g1168 411 SMART agenet_At_2 272 340 IPR014002 -
Tpr5g1168 411 SMART agenet_At_2 155 210 IPR014002 -
Tpr5g1168 411 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 23 411 - -
Tpr5g1168 411 Gene3D - 264 341 - -
Tpr5g1168 411 Gene3D - 73 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1168 Tpr-Chr5 23123058 23126126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1168 283 400 PHD Transcription Factor Family AT5G58610 33.094 7.49e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1168 - - mtr:MTR_2g033390 533.102