Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1164 ATGGAGGAGAAGAAGAGAGAAGAGAACAAAAACCCCACCAACTCATCATCCACCACCATCACCACCACCATGACATTTTCCAACGAGATTCCGACCACCACCACCACCAACAACAACTACACAACTTTATTCCCTTTTCAACCTTCAATCTCAACTTTCTTTGACACCATGGCATCTTCTGACCAAAAAGCTTCATCTTTTGGATTCATGGACATGTTGGGTTCTCATGATTACATCAACAACAATTTTTTATTATCCGATTGGGTTCTTCCTACTGTTGCAACAACAACAACTCATCATCCTCTTCCTTCGCCAGCAAGTTCTAGCGTCCCAGACTCTTCTGGGACGCTGAACACTCCGGCTAATTCTACTTCAATTTCTTCTTCGTCTAATGAAGCGACGATTAATGATTCATTAGAACAAAATAGAAGTAAAGTTTCAAGAAATGAACATGATGCAGAGGTTGAGGAAGATGTAAATGGAGGCAGAGGAGATGAGCAAGATCAAGACAAGTCTAAGAAACAATTGAAAGCAAAGAAGAAGAACCAAAAGAAGGAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCACCTAGATGATGGCTATAGGTGGCGTAAATATGGTCAAAAAGCCGTGAAAAACAGTCCTTATCCCAGGAGCTACTATCGTTGTACAACGGCAAGTTGCGGCGTGAAAAAACGCGTGGAGCGTTCATCTGATGATTCTTCCATTGTCGTAACTACATATGAGGGTCAACACACACATCCTTGTCCTGCCACGTCACGTCATCCTAACCTCAGCTTCGTCAACGCCCAACCTACTGCTTCGGGTTCACACTCACACTTTCTATTACCAACATTGTTGTACAATAACCCCACTACTAATATTACTACTACTACTACTACTACACCCCCTAGTTCTTCTCATGTTGGTGCTTCTAGTGGTACTTATCTTAACACGTCGTCGTTTGGTGGTTTTGTTCATGACCAAGGGATTAATCATATAAGAGAGGCTTTGTTAAGAGATAATGGATTGCTTCAAGATATTTTTCAGATGAAAAAAGAAGAGAATGATTCGTTCAAAGATCAACATTAG 1107 0.411 MEEKKREENKNPTNSSSTTITTTMTFSNEIPTTTTTNNNYTTLFPFQPSISTFFDTMASSDQKASSFGFMDMLGSHDYINNNFLLSDWVLPTVATTTTHHPLPSPASSSVPDSSGTLNTPANSTSISSSSNEATINDSLEQNRSKVSRNEHDAEVEEDVNGGRGDEQDQDKSKKQLKAKKKNQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTASCGVKKRVERSSDDSSIVVTTYEGQHTHPCPATSRHPNLSFVNAQPTASGSHSHFLLPTLLYNNPTTNITTTTTTTPPSSSHVGASSGTYLNTSSFGGFVHDQGINHIREALLRDNGLLQDIFQMKKEENDSFKDQH* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1164 368 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 65 356 - -
Tpr5g1164 368 Coils Coil 166 186 - -
Tpr5g1164 368 Pfam WRKY DNA -binding domain 203 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g1164 368 MobiDBLite consensus disorder prediction 12 26 - -
Tpr5g1164 368 ProSiteProfiles WRKY domain profile. 197 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g1164 368 MobiDBLite consensus disorder prediction 100 191 - -
Tpr5g1164 368 Gene3D WRKY domain 186 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr5g1164 368 MobiDBLite consensus disorder prediction 100 142 - -
Tpr5g1164 368 MobiDBLite consensus disorder prediction 1 26 - -
Tpr5g1164 368 Coils Coil 136 156 - -
Tpr5g1164 368 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 356 IPR044810 GO:0003700
Tpr5g1164 368 SMART WRKY_cls 202 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g1164 368 MobiDBLite consensus disorder prediction 143 175 - -
Tpr5g1164 368 SUPERFAMILY WRKY DNA-binding domain 194 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1164 Tpr-Chr5 23055859 23059575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1164 172 360 WRKY Transcription Factor Family AT2G47260 52.261 1.93e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr5g1164 WRKY 2.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1164 - - mtr:MTR_2g033820 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1164 5 23055859 23059575 Tpr5g1164 5 23055859 23059575 ECH