Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1158 ATGGCGTCATCTATGATCTCAAACACAACAATACCACCAACAACAAGTGACCGATCACATAGAATAAAAAGGAAGAAAAAAGCCCAATCAAAAGCCCAACAGGCCCAAGAACAACAACAAAGGTTACAAAGCCATGCTAAATGGAGATCACAAGCCCAACAACAAATCTACTCTTCCAAACTCCACCAGGCTTTATCAAGAGTCAACCTTTCCGGCGGGCCTCGCCGTGGCAAAGCCGTCCGGGAAGCCGCCGACAGAGTTCTCGCCACTGCTGCCAAAGGAAGAACACGGTGGAGCAGAGCCATACTCACAAACAGGCTGAGACTCAAATTCAGGAAACAGAAAAGAAATCATAATCAACAGAAAGCTGTTGGGCCGGCCCGGTCTAAAAAAGCCCGGTTCGGTGTTTTACGTCTTAAAGGTAAAACACTTCCAGCGGTTCAGAGAAAAGTGAAAGTATTGGGCCGGTTAGTTCCTGGTTGTAGAAAAGAACCGTTACCGGTTATTCTTGAAGAAGCTATCGATTATATACCGGCTCTTGAGATGCAAGTTCGCGCCATGGCAGCTTTAGCTGATTTACTATTCGGCTCTTCATCTTCTTCCGCCGCCGGCTCTAGTGATGGTTCCGGTTTGCCGCCGCCGAGTTAA 648 0.4769 MASSMISNTTIPPTTSDRSHRIKRKKKAQSKAQQAQEQQQRLQSHAKWRSQAQQQIYSSKLHQALSRVNLSGGPRRGKAVREAADRVLATAAKGRTRWSRAILTNRLRLKFRKQKRNHNQQKAVGPARSKKARFGVLRLKGKTLPAVQRKVKVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMAALADLLFGSSSSSAAGSSDGSGLPPPS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1158 215 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 195 IPR036638 GO:0046983
Tpr5g1158 215 Coils Coil 25 45 - -
Tpr5g1158 215 MobiDBLite consensus disorder prediction 32 48 - -
Tpr5g1158 215 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 19 207 IPR044660 GO:0006355
Tpr5g1158 215 CDD bHLH_AtIBH1_like 136 191 IPR044549 GO:0006355
Tpr5g1158 215 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 19 207 - -
Tpr5g1158 215 MobiDBLite consensus disorder prediction 1 16 - -
Tpr5g1158 215 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1158 Tpr-Chr5 22944524 22945763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1158 45 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 54.301 2.57e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1158 - - gmx:100792237 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1158 5 22944524 22945763 Tpr5g1158 5 22944524 22945763 ECH