Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1156 ATGCTTCAGCCATTGATGAATATTCTCTTTCCATGTTGGAAGCCGTTCGGGCACGGTGACGATTCTTCATCAGGCATTGTTGGAAGAGAAGGAAAAGACGGATTACTTTGGTTTCGTGATATTGGAAGATATGGCTCCGGTGAATTCTCCATGGCTGTTGTTCAAGCTAATCAAATCCTTGAAGATCAGAGTCAGATCGAATCTGGTCCTCTTGGAACGTTCGTCGGTGTTTACGATGGTCATGGTGGACCTGATGCTGCTCGTTACGTTTGCGATCATTTGTTCCGTAATTTTCAAGCCGTATCAAGTGAGTCAAGGGGTGTTGTGACGGATGAGACAATTCAATCAGCTTTTCGTTTAACTGAAGAAGGTTTTACTGCCAGGGTTTCTGAATTATGGAATACTCGACCTCAAGTTGCAACTACCGGAACATGTTGTTTGGTTGGAGTGATTTTTCAGCAGACACTTTTTGTGGCGAATCTAGGAGATTCCCGTGTTGTTTTGGGAAAGAAAGTTGGGAATACTGGTGGGATTGCAGCGATTCAGCTGTCTACAGAACATAATGCGAATCTTGAGCCTGTTAGACATGAGCTTAAAGAGTTACACCCTCATGATCCCCAGATTGTTGTCCTCAAGCATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGAGACGTATATATGAAACATGCACAGTTTAACCGGGAACCAATTAATCCGAAGTTCAGACTTCCTGAACCAATGCACATGCCTATCTTGTCTGCTAATCCATCTATTCTTTCTCATCCTCTCCATCCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAATAATGACCAAGCAGTCGAGATTGTTCACAGAAGTCCCCGCGCGGGTATTGCCAAGAAACTTATCAAGGCTGCCCTGCAGGAAGCAGCTAGAAAACGAGAAATGCGATATTCAGACCTTCGTTCAATTGACAAGAAAGTGCGACGGCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAATCACGACCTTATAACTAGAAGTACAGTTCAAAACCCGCCACTGTCAATTCGAAGTGCTCTCAATCACTGA 1119 0.429 MLQPLMNILFPCWKPFGHGDDSSSGIVGREGKDGLLWFRDIGRYGSGEFSMAVVQANQILEDQSQIESGPLGTFVGVYDGHGGPDAARYVCDHLFRNFQAVSSESRGVVTDETIQSAFRLTEEGFTARVSELWNTRPQVATTGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGIAAIQLSTEHNANLEPVRHELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINPKFRLPEPMHMPILSANPSILSHPLHPNDSFLIFASDGLWEHLNNDQAVEIVHRSPRAGIAKKLIKAALQEAARKREMRYSDLRSIDKKVRRHFHDDITVIVLFLNHDLITRSTVQNPPLSIRSALNH* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1156 372 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Tpr5g1156 372 ProSiteProfiles PPM-type phosphatase domain profile. 45 349 IPR001932 -
Tpr5g1156 372 Pfam Protein phosphatase 2C 71 318 IPR001932 -
Tpr5g1156 372 CDD PP2Cc 49 349 IPR001932 -
Tpr5g1156 372 SUPERFAMILY PP2C-like 57 350 IPR036457 -
Tpr5g1156 372 Gene3D - 40 360 IPR036457 -
Tpr5g1156 372 PANTHER ALPHABET, ISOFORM E-RELATED 3 372 - -
Tpr5g1156 372 SMART PP2C_4 35 347 IPR001932 -
Tpr5g1156 372 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1156 Tpr-Chr5 22925796 22934174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1156 8 367 PP2C-type Phosphatase Gene Family AT3G55050 59.459 3.42e-157 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1156 K01102 - gmx:100790813 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1156 5 22925796 22934174 Tpr5g1156 5 22925796 22934174 ECH