Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1150 ATGGAAACTCCAGAACCAGAAGGTGAACTTCTCAAAAAGATTGAAAGACTTGAAGCTGGTCAAGTTCATCTCAAGCAAGAAATGTCAAAGCTTAAGCTTTCTCAACGTAGAAGGTCTCATTCAGTTTCACCACAACGTTCAAGATTAGGTGCTTCTGTTTCTGCTTCTGGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTGCTGCAAATAAGTATAATAAAGGCTCTTCTTCACCTCTTCAAAGAGAGAGTCGTTCAAGTCATGATCCTCTTCATCAAAATGGTGGCAAGTATCTCAATATTTTGCAGTCAATTGGTCATTCTATTCATATATTGGATCTTCAATGTCGTATTATATACTGGAACCCAAGTGCTGAAAATTTGTATGGTCATACAGCAGAAGAAGTTCTTGGTCATGATGGGATTGAGGTGCTTGTAGACCCTAGTGAATTTGACTTAGCTAGTGATATATTCAACCGTGTGAAAATGGGAGAAAGTTGGACTGGTCAATTTCCTGTTAAGAATAAGATGGGGGATAAGTTTGTAGTTGTTGCAACCAATACACCTTTCTATGATGATGATGGAAGCTTGATTGGTGTTATTTGTGTCTCGAGTGATTCAAGACCTTTCCTTGAAAATATAGTTCCTTTTTCAGTTGGAAAGAATGAAGAAAAGGATTCAGGTGTTAATTTTCCTAGAATTGCCATTACAAATAAGCTCGGTCTTGATCCTCAACAGCCACTTCAAAATGCTCTAGCATCGAAAATCTCAAATTTGGCTTCAAAGGTGAGTAACAAAGTCAAATCTAAAATCCGGACGCGAGAAAATGGTGTCGGTAGAGAAGGAGGGAGTGGAGAAAGTCATCATTCCGAGCATGGTTTCTCGGATTATGGTCATGCTGACCAGAGAGAGGATGGTGGTAATTCCAGTGGAGCTAGCACACCCGCAGGAGAGGTGCCTCCGACTCCTTTTGGTTCATTTACTCATGTCGAAGAGAGATCCCAAGGGAAAACTACGAGGAACTCTAGCGATGAGAGTGAAGAAAAACCTATACACAAAATCATAACTTCTAAGGCTGAAGCATGGATTCAAAAGAAAACTATGTCATGGCCATGGAAAGCAAATGATCGAGAAGAATCCGAGTCAAAGAACGTTCGTGTTTCTTGGCCTTGGTTGCAGGGTGATCAAGAAAAAGAGTCAACTAATCAGAAGAATCTGTCGTCTGGATTGAAGCAGCCCGAAAGCCGGGCTGCTGAAAGTTATCAACATGTTCCAAATGAGGCTTCAGGAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTACCAGCAGTTGCGGGAGTGGCAGCGGTAGCAGTTCTGCTGCTAATAATAGAGTGGATGTTGATTCTGATTGTTTAGATTACGAAATTTTGTGGGAGGACCTTACAATTGGAGAGTCTATTGGACAAGGTTCTTGTGGAACTGTATACCATGCTCTGTGGTATGGATCGGATGTTGCTGTAAAGGTTTTCTCAAAGCAAGAATATTCAGAAGATTTAATACAGTCCTTCAGACAAGAGGTGTCTCTCATGAAAAGACTTCGCCATCCAAATATTCTACTTTTTATGGGCGCAGTAACTTCACCTCAGCGTCTAGGCATTGTAACAGAGTTTCTACCACGCGGAAGCTTATTTCGTTTGCTTCAGAGAAACACGTCCAAACCTGATTGGAGACGGAGAGTTCACATGGCTGTAGATATTGCACGAGGTGTAAATTATCTTCATCATTGCAACCCCCCTATCATCCATCGAGATTTGAAGACTTCGAATCTTCTAGTTGATAAGAATTGGACTGTAAAGGTCGGTGATTTTGGTCTTTCACGCATCAAACATGAAACCTATCTCGAGACTAAAACTGGAAAAGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAACGAACCCTCCAATGAGAAGTCCGATGTTTACAGCTTTGGAGTGATTATGTGGGAACTTGCAACTGAAAAAATCCCTTGGGATACTCTGAATGCAATGCAGGTTATCGGAGCTGTAGGGTTTATGAACCACCGCCTAGAAATTCCGGAAGATATTGATCCACAGTGGGCTTCTATAATCGAGAGTTGTTGGCATACTGATCCGGCTAGCCGACCAACATTCCAAGAACTGCTGGAAAGGCTTAAAGAACTTCAGCGACGCTACGCCATTCAGTTCCAAGCAGCCAGATCTGCTGTTGGGGAAAACACTCAAAGGAATCCTAGCTGA 2274 0.4217 METPEPEGELLKKIERLEAGQVHLKQEMSKLKLSQRRRSHSVSPQRSRLGASVSASGSSSSSSSSSSAAANKYNKGSSSPLQRESRSSHDPLHQNGGKYLNILQSIGHSIHILDLQCRIIYWNPSAENLYGHTAEEVLGHDGIEVLVDPSEFDLASDIFNRVKMGESWTGQFPVKNKMGDKFVVVATNTPFYDDDGSLIGVICVSSDSRPFLENIVPFSVGKNEEKDSGVNFPRIAITNKLGLDPQQPLQNALASKISNLASKVSNKVKSKIRTRENGVGREGGSGESHHSEHGFSDYGHADQREDGGNSSGASTPAGEVPPTPFGSFTHVEERSQGKTTRNSSDESEEKPIHKIITSKAEAWIQKKTMSWPWKANDREESESKNVRVSWPWLQGDQEKESTNQKNLSSGLKQPESRAAESYQHVPNEASGGSWSSFNVNSTSSTSSCGSGSGSSSAANNRVDVDSDCLDYEILWEDLTIGESIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEDLIQSFRQEVSLMKRLRHPNILLFMGAVTSPQRLGIVTEFLPRGSLFRLLQRNTSKPDWRRRVHMAVDIARGVNYLHHCNPPIIHRDLKTSNLLVDKNWTVKVGDFGLSRIKHETYLETKTGKGTPQWMAPEVLRNEPSNEKSDVYSFGVIMWELATEKIPWDTLNAMQVIGAVGFMNHRLEIPEDIDPQWASIIESCWHTDPASRPTFQELLERLKELQRRYAIQFQAARSAVGENTQRNPS* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1150 757 SUPERFAMILY Protein kinase-like (PK-like) 467 730 IPR011009 -
Tpr5g1150 757 SMART pas_2 97 163 IPR000014 -
Tpr5g1150 757 Pfam Protein tyrosine and serine/threonine kinase 478 730 IPR001245 GO:0004672|GO:0006468
Tpr5g1150 757 TIGRFAM sensory_box: PAS domain S-box protein 99 207 IPR000014 -
Tpr5g1150 757 SMART serkin_6 478 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1150 757 Gene3D PAS domain 108 210 - -
Tpr5g1150 757 CDD STKc_MAP3K-like 484 730 - -
Tpr5g1150 757 PRINTS Tyrosine kinase catalytic domain signature 552 565 IPR001245 GO:0004672|GO:0006468
Tpr5g1150 757 PRINTS Tyrosine kinase catalytic domain signature 591 609 IPR001245 GO:0004672|GO:0006468
Tpr5g1150 757 PRINTS Tyrosine kinase catalytic domain signature 638 648 IPR001245 GO:0004672|GO:0006468
Tpr5g1150 757 PRINTS Tyrosine kinase catalytic domain signature 657 679 IPR001245 GO:0004672|GO:0006468
Tpr5g1150 757 PRINTS Tyrosine kinase catalytic domain signature 701 723 IPR001245 GO:0004672|GO:0006468
Tpr5g1150 757 MobiDBLite consensus disorder prediction 269 304 - -
Tpr5g1150 757 ProSiteProfiles Protein kinase domain profile. 478 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1150 757 Coils Coil 723 743 - -
Tpr5g1150 757 Gene3D Transferase(Phosphotransferase) domain 1 556 756 - -
Tpr5g1150 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Tpr5g1150 757 MobiDBLite consensus disorder prediction 374 430 - -
Tpr5g1150 757 MobiDBLite consensus disorder prediction 44 85 - -
Tpr5g1150 757 ProSiteProfiles PAS repeat profile. 95 166 IPR000014 -
Tpr5g1150 757 SUPERFAMILY PYP-like sensor domain (PAS domain) 101 204 IPR035965 -
Tpr5g1150 757 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 26 753 - -
Tpr5g1150 757 MobiDBLite consensus disorder prediction 334 356 - -
Tpr5g1150 757 MobiDBLite consensus disorder prediction 387 416 - -
Tpr5g1150 757 Pfam PAS domain 110 207 IPR000014 -
Tpr5g1150 757 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 753 - -
Tpr5g1150 757 CDD PAS 110 207 IPR000014 -
Tpr5g1150 757 Gene3D Phosphorylase Kinase; domain 1 471 555 - -
Tpr5g1150 757 MobiDBLite consensus disorder prediction 26 92 - -
Tpr5g1150 757 MobiDBLite consensus disorder prediction 266 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1150 Tpr-Chr5 22872311 22878811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1150 1 752 MAP Kinase Kinase Kinase AT3G06620 57.545 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tpr5g1150 PK_Tyr_Ser-Thr 8.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1150 - - gmx:100815858 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1150 5 22872311 22878811 Tpr5g1150 5 22872311 22878811 ECH