Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1141 ATGGCGTTTTGGTGGTCCTTGCTCGTTTTAGCATTCGCTTTCGCCATTTGCAAGTTTCTTCTCATTCTCATTCCTCCTAAAGTTCCTTCAATCGATGTTGATGCTTCCGATGTGTTGGAATATGGAAGCCAATCGCAGGAGAATAGATTCATATATGTGCCTCCAAGGGGTGCGGCACAACAATCAGGCAAGAAAGTTCAGTGCTATGAGCCTGCCACCATGAAATATTTGGGATATGTTCCTGCTTTGACACCGGATGAGGTCAAGGAGCAAATTGAAAAGGTACGGAAGGCACAAAAAATGTGGTCAAAGACCAGCTTCAAGCAAAGGCGCCAGTTTTTGCGTATAGTATTGAAGTATATAATTAAACATCAAGCACTTATCTGCGAGATATCTTCACGTGATACTGGAAAGACAATGGTAGATGCCTCTCTAGGAGAAATAATGACAACATGTGAGAAGATCAATTGGCTTCTGTCAGAGGGTGAACAATGTCTGAAACCTGAGTACAGATCCTGTGGAAGATCAATGCTTCATAAGAGAGCCAGAGTAGAATTTCACCCCCTTGGTGTTATTGGAGCCATTGTGTCGTGGAACTATCCCTTCCATAATATTTTTAACCCTATGCTAGCAGCAGTTTTTTCTGGAAATGGTATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTTCGGATTATCCAATCAGCCCTTGCTGCTATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCACTGGTGTCTTCTGTTGATAAAGTCATTTTTGTTGGATCACCTGGGGTTGGGAAGACGATAATGAAAAATGCTGCTGAGACACTTATACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGACCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGTGCTGGAGCTGAACGATTGTATGTCCATCGGAACATTTATCCAGCTTTTGTCAGCAAAGTTACCAAAATCATCAAATCCGTTACAGCTGGCCCACCACTTGCTGGGAAGTATGATATGGGAGCTTTATGCATGCATGAGCACTCTGAAAAGCTTGAAGCTCTTCTAAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGCTCGTGGAAGTTTTGGACATATAGGTGAAGATGCTGTTGATCAGTATTTTCCCCCTACTGTGATTGTCAATGTGAATCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCTATCATGCCAATAATGAAGTTTAGCTCTGATGAGGAGGTTATCAAGCTTGCTAATGACTCAAAATATGGGCTCGGCTGTGCTGTTTTCTCAGGCAGTCAAAGTCATGCCAGAGAGATAGCTTCACATATACATTGTGGGGTAGCTGCAATTAATGATTTTGCATCAACATACATGTGTCAGTCCCTGCCATTTGGGGGAGTGAAACACAGTGGATTTGGAAGATTCGGTGGTGTTGAAGGCTTGCGAGCATGCTGCCTTGTAAAATCAGTTGTTGAAGATAGATGGTGGCCATTGATTAAGACCAAGATACCAAAGCCTATTCAGTATCCTGTGGCAGAAAATGGATTTGAATTTCAGGAGTCACTCGTTGAAGCACTTTATGGGCTTAGCATATGGGATCGTTTGCAAGCATTGGTAAATGTTGTGAAAATGCTTACTGAGCAAAACTCAACTGGTGGCAATAAGAAGGAAAAATGA 1788 0.4234 MAFWWSLLVLAFAFAICKFLLILIPPKVPSIDVDASDVLEYGSQSQENRFIYVPPRGAAQQSGKKVQCYEPATMKYLGYVPALTPDEVKEQIEKVRKAQKMWSKTSFKQRRQFLRIVLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQCLKPEYRSCGRSMLHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKTIMKNAAETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERLYVHRNIYPAFVSKVTKIIKSVTAGPPLAGKYDMGALCMHEHSEKLEALLNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVIKLANDSKYGLGCAVFSGSQSHAREIASHIHCGVAAINDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPLIKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVNVVKMLTEQNSTGGNKKEK* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1141 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Tpr5g1141 595 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
Tpr5g1141 595 SUPERFAMILY ALDH-like 60 529 IPR016161 GO:0016491
Tpr5g1141 595 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Tpr5g1141 595 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Tpr5g1141 595 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Tpr5g1141 595 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Tpr5g1141 595 CDD ALDH_F15-22 69 531 - -
Tpr5g1141 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1141 Tpr-Chr5 22699853 22707037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1141 1 588 Aldehyde Dehydrogenase Gene Family AT3G66658 80.102 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1141 - - gmx:100816920 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1141 5 22699853 22707037 Tpr5g1141 5 22699853 22707037 ECH