Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1135 ATGGACAACCGACATGAGGTGATAGTCGAAAAGGTATGTAAAATCTATGATAAACTCTCTAAGCTAGAAAACCTTAATCCTTCAAACCAAGTCAATGACCTATTTACCCAACTTGTAACAACATGCACCACACCATGTCATGAACTTGATATTACTAAATTACCCCTAGAAATCAAAGAAAAAATAGCTAAACTAATTACCCTTTGTGGAAAAGCTGAAGGACTACTTGAAAGTCATTTCTCAACTCTCATAGGATCAAATGAAAAACCATTAAACCACATAAAAATTTTCCCTTACTACAAAAACTACCTCAAACTCACACATTTAGAATTCACTATGCTCACCAAACACATAACTCAAGTTCCTTCAAAACTTGCCTTTATTGGTTCTGGTCCCTTGCCTCTAACCTCAATCATGTTAGCAAACTATTACCTAACAAAAACATGTTTCCATAACTATGACATTGATTCATTAGCAAATTCAAAAGCTTATGATTTAATCTCAAAAGACAGTGACTTGTCAAAGAGAATGTTTTTTCACACTAGTGATATTTTTGATGTCAAAAATGTTCTTAAAGATTATAATGTTGTATTTTTGGCTGCATTGGTTGGTATGGACAAAAAGGAGAAAGCAAAAGTGATTAATCACTTGGCTAAATACATGGCTCCTAATGCTATTCTTGTTCTTAGAAGTGCACATGGAGCTAGAGCTTTTCTATATCCTATTGTTGATCCTTGTTTTGATCTTAAAGGTTTTGAAGTTTTGTCAATTTTTCATCCAATTGATGAGGTTATAAATTCGGTTATTGTTGCAAGAAAGTGTTTGGTGAATCAACAAGGGATTAATTACTTGAAAAACAAGTGTTGTGAAGTAGAAGGTTTTAATCCATTGAACCATGGGAATGTTGTTGATGAGTTGAGCATTGAAGACCAGGCTTAA 939 0.3344 MDNRHEVIVEKVCKIYDKLSKLENLNPSNQVNDLFTQLVTTCTTPCHELDITKLPLEIKEKIAKLITLCGKAEGLLESHFSTLIGSNEKPLNHIKIFPYYKNYLKLTHLEFTMLTKHITQVPSKLAFIGSGPLPLTSIMLANYYLTKTCFHNYDIDSLANSKAYDLISKDSDLSKRMFFHTSDIFDVKNVLKDYNVVFLAALVGMDKKEKAKVINHLAKYMAPNAILVLRSAHGARAFLYPIVDPCFDLKGFEVLSIFHPIDEVINSVIVARKCLVNQQGINYLKNKCCEVEGFNPLNHGNVVDELSIEDQA* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1135 312 Gene3D Vaccinia Virus protein VP39 6 275 IPR029063 -
Tpr5g1135 312 PANTHER NICOTIANAMINE SYNTHASE 3 1 312 IPR004298 GO:0030410|GO:0030418
Tpr5g1135 312 PANTHER NICOTIANAMINE SYNTHASE 1 312 - -
Tpr5g1135 312 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Tpr5g1135 312 Pfam Nicotianamine synthase protein 2 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1135 Tpr-Chr5 22674764 22676056 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1135 7 273 Nicotianamine Synthase Gene Family AT5G56080 59.108 3.21e-113 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1135 K05953 - gmx:100814069 462.225