Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1134 ATGGAAAACTTTTGCAATTTTGGTGAGATAAGTTTCAGTGCAATTGAGGACAAACTTAGTTCATCCAATGATACTTTCTGGCATACCAAAAAAGTTACTGCAATGAAAAATGTTCAATTTTCTGTAGCAGAAGATCAAGGAGACCATAATGGCATTGAGTCTCTTCGCTCAAATTTTGGTTTCTTTCCGCAAGAAGAAGAGTTACTTCTTTCCACTAATCAACAAAAGTTTCATCATCAAGATTATGAACCTTTTGATAATCTACAATTTGATATGGTTCAATTTGATGAACAGTTTGAAACCAAAACTCTTCCACTTTGTGACACAAAAAAGGGCAAACAATATTACCAAAATACCCCTTTAGCTGCACCAGTTGAAATATTGAAGAATTATGGCAAAGGATTCAAGAGGTTATTACCTGATGAAGGAAAAATCCTTCATCCTGTCAATGATTTTGGTTTAGTCACGGATAATGAAAATGAGAGAAAGTTGTCGACCACAGATATCATGAAGATAGCTGGAACTAAGTTCATACAATCATCATCTTCATCAGATCATTCTGCATCAGGTTTGATTCTTAATCACCCTTTTGGTTTTTCTTTCTCCGGTCTATCCGATGAAGAGAAAGAAGATATTTCACTTGCTGAATCACTCTTAACTTGTGCTGAGAAAGTTGGATATCAACAATTTGAACGCGCTAGAAAAGTTTTATCACAAATTGAGTCTTTATCTTCGAAGACAGGTAACCCGGTTAAGCGCGTGGTTCATTATTTTGCCGAAGCTCTTCGTCAAAGAATCGACAAAGAAACAGGTAGAGTATCTATTAACAATATGCAAAAGAAGGAATCTTTATTTGATCCTGAAGCGGAAACCAAGGATCTAAATCCGACCCTTGTCGCGTTTATTGAAGATCTTCCATTTTGTAAAGTTGCAATGTTCACATGTGTACAAGCTTTAATAGAAAATGTAACTGATGCAAAGAAGATTCATGTTATTGATCTCGCAATTCGAAAAGGGTTACAGTTGGCAATCCTAATGCAAGCGCTTCAATCGAGAAACGAATGTCCACTCGAGCTTCTAAAGATAACAGCTATTGAGAGCGGAAACACAGACACTTCAAAGCTTGCAGTCGAAGACACTGGTAAGAGATTGAAAGAATTTGCGCAAAGTTTGAACATACCTTTTTCATTTGATATAATTATTGTATCTGATTGGTTAAACCTAAGAGAAGATCATTTTAAGATAGATTCAGACGAAACTGTTGCGGTTTATTCTCAATTTGCGCTTAGATGCAAGATTCAACAATCCGACCAGCTTGAAACAGTCATGAGAGTGATTAGAACTATAAATCCAACAGTAATGGTTGTCGCCGAGATTGAAGCAAATCACAATTCTAAATCTTTTGTTAACCGTTTCATCGAAGCACTTTTCTACTTTAGTGCATTTTTCGATTGTTTAGAGGATTGCATGAAAGGCGATGAGAAAAATAGAATGATTATGGAATCAATGTATTTTAGTCATGGTATAAGGAATAATGTAGCTGAAGAAGGAGCTGAAAGAAAGAGTAGAAATGTGAAGATTGATGTGTGGAGAGCATTTTTTAGTAGATTTGGAATGGTTGAGACAAAATTGAGTATGATATCTTTGTATCAAGCTGAATTGGTTGCTAAAAGATTTTCTTGTGGAAGTTCTTGCACATTTGATATGAATGGTCATTGTCTTCTTGTTGGATGGAAGGGAACACCTATTAATTCTGTTTCTGTTTGGAAATTCATTTGA 1779 0.3541 MENFCNFGEISFSAIEDKLSSSNDTFWHTKKVTAMKNVQFSVAEDQGDHNGIESLRSNFGFFPQEEELLLSTNQQKFHHQDYEPFDNLQFDMVQFDEQFETKTLPLCDTKKGKQYYQNTPLAAPVEILKNYGKGFKRLLPDEGKILHPVNDFGLVTDNENERKLSTTDIMKIAGTKFIQSSSSSDHSASGLILNHPFGFSFSGLSDEEKEDISLAESLLTCAEKVGYQQFERARKVLSQIESLSSKTGNPVKRVVHYFAEALRQRIDKETGRVSINNMQKKESLFDPEAETKDLNPTLVAFIEDLPFCKVAMFTCVQALIENVTDAKKIHVIDLAIRKGLQLAILMQALQSRNECPLELLKITAIESGNTDTSKLAVEDTGKRLKEFAQSLNIPFSFDIIIVSDWLNLREDHFKIDSDETVAVYSQFALRCKIQQSDQLETVMRVIRTINPTVMVVAEIEANHNSKSFVNRFIEALFYFSAFFDCLEDCMKGDEKNRMIMESMYFSHGIRNNVAEEGAERKSRNVKIDVWRAFFSRFGMVETKLSMISLYQAELVAKRFSCGSSCTFDMNGHCLLVGWKGTPINSVSVWKFI* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1134 592 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 42 590 - -
Tpr5g1134 592 Pfam GRAS domain family 215 590 IPR005202 -
Tpr5g1134 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 590 IPR005202 -
Tpr5g1134 592 ProSiteProfiles GRAS family profile. 205 590 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1134 Tpr-Chr5 22669959 22671931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1134 204 591 GRAS Transcription Factor Family AT3G03450 30.227 7.46e-57 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr5g1134 GRAS 3.3e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1134 - - gmx:100798926 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1134 5 22669959 22671931 Tpr5g1134 5 22669959 22671931 ECH