Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1121 ATGAGGGATATGGCTTTGCAGAAGTATGCTCCTTCTGGCGATGCACCTACTGTTAATCTGAAACATTTGAGTTTCTCTAGTAAGGTCCCTGAGAAAACTCAGTCTGATGTGGCAAATCAGAATCATGAGATGGATGTGGATGTTGACCTTGGGGAAGTTTATTTTCTCATTATGCACTTCCTTTCTGGCGGGCCATGTCAAAAAACTTATTTACAGTTTAAGAATGAGCTTCTGGAGAATCAACTATTGCCTAGAAGATATCATGCTTGGTATTCAAGGAGTGGGGCATGCAGTGGTGTTATACAAGATGATGGTCAATCATTCCCTTTAGGTTACAATAAGTTGGTGGAGAGGTATCCTCATATTGAAAAGGATCACTTGGTAAAGCTTTTGAAGCAATTGTTATTAAACAAAGCCTCCTTGTCACCAGGCTTGAGTACTGGAAATGCTCCAAATGCAGCTGATGTACCCACTCTTCTGGGAACGGGATCATTTTCACTTCTGAGCTATGACAGGGAGAAAGTGAATGAAGAAGTCAAACCGCCACCTCCTTATATGCGCTGGCCTCATATGAAAGCAAATCAGGTTCACGGGCTTGGTTTGAGGGAAATCGGGGGCGGTTTTCCAAGACATCACCGTGCACCATCTATACGTGCTGCATGCTATGCCATTGCAAAACCTTCTACTATGGTGCAGAAGATGCAAAATATCAAGAGAGTTAGAGGACACCGTAATGCTGTTTATTGTGCTATATTAGATCGGTCTGGAAGATATGTTATTACTGGTTCAGATGACCGACTTGTTAAAATTTGGTCAATGGAAACTGCATATAGTTTGGCCAGTTGCCGTGGACACGATGGTGACATTACTGACTTGGCTGTGAGCTCAAACAATGCTGCAGTTGCTTCCTCATCAAATGACTGCATTATTCGAGTTTGGCGCTTGCCAGATGGCTTACCAATATCAGTTTTGCGGGGGCATTCTGGAGCTGTTACAGCCATAGCCTTTAGTCCCCGGCCTAATGCTGTTTACCAGCTTTTATCTTCCTCTGACGATGGAACTTGTAGGATATGGGATGCAAGAAATACCCAGTCAAGTCCAAGATTATATATTCCAAAGCCTTCTGATTCTGTTGGAAGGAGCAGCGGCCCATCCTCAAATACAATGCCACAAAGTCATCAAATTTTTTGCTGTGCATATAATGCTAATGGAACTGTCTTCGTCACTGGTAGCTCTGATAATCTTGCCAGGGTCTGGAATGCTTGTAAAGTTAATACGGAAGATGCTGACCAACCAAATCATGAGATAGATGTACTATCTGGTCATGAAAATGATGTAAACTATGTGCAATTTAGTGGATGTGCTGCAGCATCTCGATTTTCCACAACAGAAACTTGGAAGGAGGATAATATTCCCAAATTTAAGAATTCCTGGTTGAATCATGACAACATTGTTACCTGCTCTCGTGATGGTAGTGCCATTATATGGATTCCAAAATCACGCAGGTCACATGGGAAAATTGGTCGCTGGACTCGGGCATATCATCTCAGAGTTCCACCTCCACCTATGCCTCCACAACCTCAGAGAGGTGGTCCACGCCAGAGAATTCTACCAACTCCACGTGGTGTAAATATGATTGTTTGGAGCCTAGACAACCGCTTTGTCCTTGCAGCCATTATGGATTGCAGAATCTGTGTTTGGAATGCTTCTGATGGCAGCTTAGTGCACTCATTGACTGGGCATACTGAATCTACATATGTTCTGGATGTTCATCCTTTTAATCCGCGGATAGCAATGAGTGCTGGATATGATGGAAGAACTATTGTATGGGATATATGGGAAGGTGTGCCTATCAGGATATATGAGATATCACGTTTCAAGTTGGTGGATGGAAAATTTTCTCCGGATGGGACATCAATTATACTATCTGATGATGTTGGTCAACTATATATATTAAACACTGGTCAAGGTGAATCCCAGAAAGATGCCAAATATGATCAGTTCTTTCTTGGTGATTATCGGCCTCTCATTCAAGACACACATGGTAATGTACTTGACCAGGAAACTCAGATGATTCCTTATCGACGTAATATGCAAGATTTGCTTTGTGATTCAGCAATGATACCATACCCAGAACCTTATCAGAGTGAATTTCAGCGTAGACGACTTGGAGCTTTCGGCCAGGAATGGCGCCCGTCATCGCTAAAGTTTGCTGTTGGCCCTGATTTCAGTCTGGACCCAGAGTATCATATGGTTCCATTGGCTGACTTGGACATGCTTATAGAACCACCACCAGAGTTTATAGATGTTATGGATTGGGAGCCAGAAATTGATGTGTTTGCTAATGATACCGATTCAGAATATAATTTAACTGATGATAGTTCTTCCCGGGGTGAGAAAGGATGTTCAAGCTCCAATGCCTCTGGTGATCCTAGTTGCAGCACAGATAACAGTGACAATGAGGACATTCACATGGATTCCATTCGTAGATCGAAGAGGAAAAAACAGAAGACTGGAATTGATATTACGACTTCTTCTGGGAGACGTGTTAAAAGGAGGAATTTGGATGAGTGTGATGGCAATGTTCACAGTAGTAGCCGAAGTAGGAAGGGTAAAGGTGGACAAAAATCATCACGGAGGAAATCTTCTAAATCAAAATCTTCCAGACCTCAAAGAGCTGCTGCACGCAATGCTCTGAATCTATTCTCAAAAATTACAGGTGGACCAATTGAAGAAGAAGAAGAAGAAGAAGATAGTTTGGTTGGTGATTCTTCAGATAGTGACTCAACATTGCAAGAGTCTAATATAGACAGTGAAGAATCTGGTAGAGCTTCCCAAAATGACCAACGGAATAATTCCAAGGGAAAGGAAGTGTTACTGTATGAATCAGAGGACACAAAATCTCATGAATTGACCGAGAGTCGTGTAAACAGAAGGAGGTTGGTCCTCAAATTGCCAATTCGGGGTTCATCTAAACCCGCACATGAGTTTGAGAACCAGGCTGGGTTGGTTGGCTCATCGTCAAAAACTGCTCAAGAATCCCATGATTTTAATGGGAACAACAGACCAAGTTCTACAGAGCAAGGATATCGTTTTGGCAATGGAAGTTACTCTTCAATTGAAAGAAAAGATCAAGTAAATGTAGACTTACTAGAGAAAATTAGATGGGGGGAGGTTAGGGCTCGTTCATCTAAACCTCTCAGAGTGAGAGAAGCTGTGCAACAAGTTGCAAATCCCAACTCTTTGAAATGTCCTAACCATCTCAATGAAAATGAAAATGTCAGTACTGGGCAAGAGAAAGAGGACAAGGACTTCACTAGTACATCCACCCCTGCTTTAGAAATCCAAAATGATGATAAGGTAGATAGTTTGACAGAAATAAATGAAAATTGTGCTGGTACTACCTCTCAGCCATTTAATACTACTGGGAATGGTGAACCAGTCGCAGCTTCCAGCAATTACAGGGATCAAGATGAATCACTAGTTTCTGCAGGCATGACTCCGCAGGATACTATTCTTGTATCTGTCGGCCATAGTGGTGTTGACCAACTACCTGAACCAAATATTGGTTTTCCTTCTGTTTCAACAAAGCTGAGGTCTAAAAGGGGTACGAGGAATCCTGAAAGTCCATGTAAGCATGAAACAAAATCATCAGTGCTAAAGAATATTGCATCTAGCTGCAATGCTGATAATAATTTGAACAATGAAGAGCATTTGGTTGTGGTTAAGGATGAGAACAATACTAGACTAACATCTAATCAGAGAGAAAATGATTCTCAAGAAGTTGATGCTCAGGTTAAACAAGTTACTACTTCACATGATTCACTAGAACCACATTCAAATAGAGATAAAATGTTCAAAGCTGTTTATAGAAGATCAAGATCACATAGGGCTGTGGCTAATTTAGCTGATGGTAGTGGCATGGGAGAATCCACTTCAAATGGGAGCAACAGTAATCTTAATGTGGCAGTGGACAGTAATGGCACAAATGAAGCTCTTCATACCAATGGTTCCCTAGAGTTGGAACTAGGTACTCGTGTCCCAAATAATGAGCAGAGTAATCTTAGAGTGCAACAAAGAAATGGATCTTGTATGGTTAGAATTCCTCAGAATGTTTCCCCAAATAAAGGAAAGCTCACAGAAGAAAGGGGTTCTAATTCAAATTTGACTGTTGGTTTGAGGTCCACTAGGAATCGGAGGTCTACTTATAATATCCGTGATACTAGTCCTGTAAATAGAAGGAAATCACTACAATCAACTTTGAAGGGATCCTGGTTGCTGTTATCCACACATGAGGAAGGATGTAGATATATTCCTCAACAGGGAGATGAAGTGGTGTATTTAAGACAGGGACACCAGGAATATATAGATTATAGCCATAAAAGAGAATCGGGGCCTTGGGTGTCACTTAAGGGACATCTAAGAGCTGTAGAATATTGTAGAGTTCAAAGCCTCGAGTATTCTCATGTTCCAGGGTCGGGTGATAGCTGCTGCAAAATGACCCTCCAGTTTGTAGATTCAAATTCAAGTGTTGTTGGCAAAACTTTTAAATTAACCCTACCTGAAGTGACCAGTTTCCCTGATTTTCTTGTTGAAAGAACTAGATTTGATGCTGCTATCCAAAGAAATTGGACACGCAGGGATAAATGCAGGGTTTGGTGGAAGAATGAGGATAATTCCTCTGGTAATTGGTGGGAGGGTCGAATTCAGTTTGTGAAAGCCAAATCTTCTGAATTTCCAGACAGTCCATGGGAGAGATATAGTGTTCGGTACAAGAGTGACCTCTCTGATGAACATTTGCATAGTCCTTGGGAGCTTTTTGACGCTGATACTCAATGGGAACAGCCACATATTGATGATCACGCAAGAAATAAACTGCTATCTGCTCTCGCCAAATTACAGCAGTCAGGCAACACCCTTCAGGACCGTTATGGACTGCATGAACTGACGAAAATTTCAAATAAGTCAAAATTTACGAACAGATTTCCTGTTCCTCTGTCTATTGAATTGATGGAATCAAGGTTGGAGAATAATTACTACCGAAGTTTGGAGGCACTGAAGCACGATGCCTCAATTCTACTGTCCAATGCCACCTCGTTTTTTGAAAAGGATGCCGAGATGACTACCAAAATTAAACGCCTATCAGACTGGTTCACTCGGACATTATCATCTTTATAG 5178 0.4158 MRDMALQKYAPSGDAPTVNLKHLSFSSKVPEKTQSDVANQNHEMDVDVDLGEVYFLIMHFLSGGPCQKTYLQFKNELLENQLLPRRYHAWYSRSGACSGVIQDDGQSFPLGYNKLVERYPHIEKDHLVKLLKQLLLNKASLSPGLSTGNAPNAADVPTLLGTGSFSLLSYDREKVNEEVKPPPPYMRWPHMKANQVHGLGLREIGGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAILDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHDGDITDLAVSSNNAAVASSSNDCIIRVWRLPDGLPISVLRGHSGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARNTQSSPRLYIPKPSDSVGRSSGPSSNTMPQSHQIFCCAYNANGTVFVTGSSDNLARVWNACKVNTEDADQPNHEIDVLSGHENDVNYVQFSGCAAASRFSTTETWKEDNIPKFKNSWLNHDNIVTCSRDGSAIIWIPKSRRSHGKIGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGVPIRIYEISRFKLVDGKFSPDGTSIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQMIPYRRNMQDLLCDSAMIPYPEPYQSEFQRRRLGAFGQEWRPSSLKFAVGPDFSLDPEYHMVPLADLDMLIEPPPEFIDVMDWEPEIDVFANDTDSEYNLTDDSSSRGEKGCSSSNASGDPSCSTDNSDNEDIHMDSIRRSKRKKQKTGIDITTSSGRRVKRRNLDECDGNVHSSSRSRKGKGGQKSSRRKSSKSKSSRPQRAAARNALNLFSKITGGPIEEEEEEEDSLVGDSSDSDSTLQESNIDSEESGRASQNDQRNNSKGKEVLLYESEDTKSHELTESRVNRRRLVLKLPIRGSSKPAHEFENQAGLVGSSSKTAQESHDFNGNNRPSSTEQGYRFGNGSYSSIERKDQVNVDLLEKIRWGEVRARSSKPLRVREAVQQVANPNSLKCPNHLNENENVSTGQEKEDKDFTSTSTPALEIQNDDKVDSLTEINENCAGTTSQPFNTTGNGEPVAASSNYRDQDESLVSAGMTPQDTILVSVGHSGVDQLPEPNIGFPSVSTKLRSKRGTRNPESPCKHETKSSVLKNIASSCNADNNLNNEEHLVVVKDENNTRLTSNQRENDSQEVDAQVKQVTTSHDSLEPHSNRDKMFKAVYRRSRSHRAVANLADGSGMGESTSNGSNSNLNVAVDSNGTNEALHTNGSLELELGTRVPNNEQSNLRVQQRNGSCMVRIPQNVSPNKGKLTEERGSNSNLTVGLRSTRNRRSTYNIRDTSPVNRRKSLQSTLKGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYIDYSHKRESGPWVSLKGHLRAVEYCRVQSLEYSHVPGSGDSCCKMTLQFVDSNSSVVGKTFKLTLPEVTSFPDFLVERTRFDAAIQRNWTRRDKCRVWWKNEDNSSGNWWEGRIQFVKAKSSEFPDSPWERYSVRYKSDLSDEHLHSPWELFDADTQWEQPHIDDHARNKLLSALAKLQQSGNTLQDRYGLHELTKISNKSKFTNRFPVPLSIELMESRLENNYYRSLEALKHDASILLSNATSFFEKDAEMTTKIKRLSDWFTRTLSSL* 1726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1121 1725 CDD Bromo_WDR9_I_like 1597 1725 - -
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 1001 1029 - -
Tpr5g1121 1725 Gene3D - 216 389 IPR015943 GO:0005515
Tpr5g1121 1725 PANTHER WD REPEAT DOMAIN 9 19 1725 - -
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 784 973 - -
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 846 866 - -
Tpr5g1121 1725 Gene3D - 1626 1725 IPR036427 GO:0005515
Tpr5g1121 1725 ProSitePatterns Trp-Asp (WD) repeats signature. 346 360 IPR019775 -
Tpr5g1121 1725 SUPERFAMILY WD40 repeat-like 232 655 IPR036322 GO:0005515
Tpr5g1121 1725 Gene3D - 390 457 IPR015943 GO:0005515
Tpr5g1121 1725 SUPERFAMILY Bromodomain 1655 1723 IPR036427 GO:0005515
Tpr5g1121 1725 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 324 362 - -
Tpr5g1121 1725 ProSiteProfiles Bromodomain profile. 1665 1708 IPR001487 GO:0005515
Tpr5g1121 1725 ProSiteProfiles Trp-Asp (WD) repeats profile. 282 323 IPR001680 GO:0005515
Tpr5g1121 1725 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 19 1725 - -
Tpr5g1121 1725 ProSiteProfiles Trp-Asp (WD) repeats profile. 578 612 IPR001680 GO:0005515
Tpr5g1121 1725 ProSiteProfiles Trp-Asp (WD) repeats profile. 388 420 IPR001680 GO:0005515
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 1078 1093 - -
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 924 954 - -
Tpr5g1121 1725 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 240 275 - -
Tpr5g1121 1725 ProSiteProfiles Trp-Asp (WD) repeats profile. 324 368 IPR001680 GO:0005515
Tpr5g1121 1725 Pfam Bromodomain 1657 1710 IPR001487 GO:0005515
Tpr5g1121 1725 ProSiteProfiles Trp-Asp (WD) repeats profile. 240 281 IPR001680 GO:0005515
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 1078 1109 - -
Tpr5g1121 1725 Gene3D - 474 669 IPR015943 GO:0005515
Tpr5g1121 1725 SMART WD40_4 530 568 IPR001680 GO:0005515
Tpr5g1121 1725 SMART WD40_4 275 314 IPR001680 GO:0005515
Tpr5g1121 1725 SMART WD40_4 317 359 IPR001680 GO:0005515
Tpr5g1121 1725 SMART WD40_4 233 272 IPR001680 GO:0005515
Tpr5g1121 1725 SMART WD40_4 571 611 IPR001680 GO:0005515
Tpr5g1121 1725 SMART WD40_4 382 420 IPR001680 GO:0005515
Tpr5g1121 1725 SMART WD40_4 432 497 IPR001680 GO:0005515
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 784 816 - -
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 869 887 - -
Tpr5g1121 1725 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 282 315 - -
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 955 973 - -
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 1374 1402 - -
Tpr5g1121 1725 MobiDBLite consensus disorder prediction 993 1029 - -
Tpr5g1121 1725 ProSitePatterns Trp-Asp (WD) repeats signature. 598 612 IPR019775 -
Tpr5g1121 1725 Pfam WD domain, G-beta repeat 320 359 IPR001680 GO:0005515
Tpr5g1121 1725 Pfam WD domain, G-beta repeat 572 611 IPR001680 GO:0005515
Tpr5g1121 1725 Pfam WD domain, G-beta repeat 235 272 IPR001680 GO:0005515
Tpr5g1121 1725 Pfam WD domain, G-beta repeat 279 313 IPR001680 GO:0005515
Tpr5g1121 1725 Pfam WD domain, G-beta repeat 392 420 IPR001680 GO:0005515
Tpr5g1121 1725 CDD WD40 236 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1121 Tpr-Chr5 22412892 22430914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1121 208 420 Eukaryotic Initiation Factors Gene Family AT2G46290 25.221 3.20e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1121 K11797 - gmx:100818665 2688.29