Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g1115 | ATGCGACGATTCCCGGCTTTCTTCCGCTATAGTTTGGAGGGTAAAATTAAGCCATTGGTTGAGTTTTTTCTTGAATTTGGAGTGCCGAAAGAACAAATTCTTATTATCCTCGCTAAAAGACCTCGATTATGTGCACTCAGTCTATCTAAAAATATTAAGCCCACCGTGAAATTCCTCGAATCTTTGGGCGTCGACAAAAAACAATGGGCGAAGGCGATATACCGCTTCCCTGCCTTGCTAACTTATAGCAGGCAGAAAATTAATGAAAGTGTAGATTTTCTCCATGAATTAGGCATCTCAGACGAGAGCATAGGTAGGATTTTAACTCGTTTCCCTAATATCGTTGGTTGCAGTGTAGAGGACAATCTCCGACCAACAGCAACGTACTTCCGTTCATTAGGGGTTGATGTTGGCGCTCTTCTGTTGAGGTGTCCGCAAATTATTGGCCTTAGCATTGAGGCGAATATAAAGCCTGTAACCGAATTTTTCTTGGAAAAGGGATATACCTTGGAAGAAATTGGGACTATGATTTCGAGATGTGCAATGTTGTACGCTTACAGCTTGACTGAGACTATGGTCCCAAAATGGGATTATTTTATGACTATGGATTACCCGAAATCCGAGCTGGTTAAATTCCCTTATTATTTTGGATACAGTTTAGAACAAAGGATTAAACCGAGATATGCACGCATGAAAAGTTCTGGGAGGAGATTAGCGTTGAATCGGCTTCTTTCACCGTCAAGCAGCAACTTTGAAAAGGTCTTAAAAATGAAAAATAAAGGAATTGCAGGTTGA | 795 | 0.4075 | MRRFPAFFRYSLEGKIKPLVEFFLEFGVPKEQILIILAKRPRLCALSLSKNIKPTVKFLESLGVDKKQWAKAIYRFPALLTYSRQKINESVDFLHELGISDESIGRILTRFPNIVGCSVEDNLRPTATYFRSLGVDVGALLLRCPQIIGLSIEANIKPVTEFFLEKGYTLEEIGTMISRCAMLYAYSLTETMVPKWDYFMTMDYPKSELVKFPYYFGYSLEQRIKPRYARMKSSGRRLALNRLLSPSSSNFEKVLKMKNKGIAG* | 265 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g1115 | 264 | PANTHER | TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC | 1 | 260 | - | - | |
Tpr5g1115 | 264 | Gene3D | Transcription termination factor 3, mitochondrial | 46 | 259 | IPR038538 | - | |
Tpr5g1115 | 264 | Gene3D | Transcription termination factor 3, mitochondrial | 1 | 45 | IPR038538 | - | |
Tpr5g1115 | 264 | SMART | mt_12 | 34 | 65 | IPR003690 | GO:0003690|GO:0006355 | |
Tpr5g1115 | 264 | SMART | mt_12 | 206 | 237 | IPR003690 | GO:0003690|GO:0006355 | |
Tpr5g1115 | 264 | SMART | mt_12 | 174 | 205 | IPR003690 | GO:0003690|GO:0006355 | |
Tpr5g1115 | 264 | SMART | mt_12 | 105 | 136 | IPR003690 | GO:0003690|GO:0006355 | |
Tpr5g1115 | 264 | SMART | mt_12 | 138 | 169 | IPR003690 | GO:0003690|GO:0006355 | |
Tpr5g1115 | 264 | SMART | mt_12 | 1 | 29 | IPR003690 | GO:0003690|GO:0006355 | |
Tpr5g1115 | 264 | SMART | mt_12 | 70 | 100 | IPR003690 | GO:0003690|GO:0006355 | |
Tpr5g1115 | 264 | Pfam | mTERF | 139 | 252 | IPR003690 | GO:0003690|GO:0006355 | |
Tpr5g1115 | 264 | Pfam | mTERF | 1 | 166 | IPR003690 | GO:0003690|GO:0006355 | |
Tpr5g1115 | 264 | PANTHER | CGI-12 PROTEIN-RELATED | 1 | 260 | IPR003690 | GO:0003690|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g1115 | Tpr-Chr5 | 22351219 | 22352533 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | mTERF | Tpr5g1115 | mTERF | 3.7e-34 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g1115 | K15032 | K12177 | gmx:100781900 | 385.185 |