Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1100 ATGGGAGTTGAAAAAGAAGGGACTAAAAGTGGAGGTAGTTTTTTCCATTTGTTTGATTGGACCTCGAAATCGCGCAAGAAATTATTTGCATCTAAGTCAGATTTACCAGAGTCTTTGAAACATGAAAGAAAAGCCAATCACAATGTCGCAATGAGACATCCATATCTGGTCGATGAAGACGAAAATGGTGTAGGGGAATATGTTAGAGGAAGTTGTGATAATAGTTATGCTTCATCTGTTACAAGTGATGACACATGTGGAACACGAGCTCCTAATGTAGTTGCAAGGCTCATGGGATTAGATTCTTTGCCTTCTTCCGGTTTCTCTGATCCTTACTCGACGCCATATTTTGAAACAAGATCCCTTCAAGATTCTCAGTTTCTATATTCTGGAAAGTTGGTTGAAAAAGTTGATGGATCGTCTAGCAACTTCGTGGAGCCAAAGCCTCAAAAGGTTATTACAAGACCAATTGAAAAGTTTCAAAGAGAAGTGTTACCTCCGAAATCGGCTAAATCGATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAATCCCGGCTTTGTTCCATCCAACAATGCTGCATATATAATGGAGGCTGCAGCGAGAATTATTGAACCTGGATCTTCCCAAGCAAAGGCTAAAACACATATGGCGGCATCATCGACAGTCTCACTGAGGGTAAAAGATGTTAGAGATAAGTTGGATTCTTCGCAGAAGGTACCTCTAATTACGACATCTTCCGTGGCTTTTAGGACTCGAGAGCTAAAAGAAAAAAGAGATATTTCTCAAAGAACAAGCAGGGTTTCAGAACGTTCTCAAAGGTCATCAGTCGAGTCGAATGCTGCAAAGTATTTAAAGGGACAGTCTTTGAACAGAAGCTGGAATGGAACTCCGGAAACATCTGTGAAGTCTCCTACAAATGCAGAAGAAGACTTTTCTTTGAAGAATAAAGGGAAGTCTGTTTTGTCTGCCGAGACATCTGTGAAGTCTCCTACACATGCAGAAGAAGACTTTTCTTTGAAGAATAAAGGGAAGTCTGTTTCGTCTGCGGAAACATCTGTAAAGTCTCCAACACATGCAGAAGAAGACTCTACTTTGAAGAATAAAGGGAAGTCTGTTTCGCTTGCAATCCAAGCAAAGGTAAATGTTCAAAGAAGGGAAGGTTTGAGTTCGACAGGTGGCAGAAACTTGATGGGCCAAAAAGAGCATGTCGACATCAAATCGAATCAGCCACTCCCTAAGGCAAATGCTCAGAAGAATTTGCATCGGAAATCTTCTGGCCAGAATTCTTCTAATGTTCTGAGGCAGAATAATCTGAAACAGAACCATTCAAATGATAATAACGACAGATTAGCACCATCTAAGCCATTGGTTTCCAATTCACAAGGAAGAAAAGTTACGACTGGAGATTCCCCTTACGGACGACACAGAAGCTCCAGTAGTAAATCTACTGCAAAATCTAAAGTTGGATCGAGAAAGTCAGCTGTGGAGGTGACAGATAGCGAAAACGAAATTCTATACACCAGCACAAACAATTTTCCAAGAAAGAAAAGGACTACGGACAAAGATTGGAACGATAGAGTTGTCGATAATTTGTTCATCGACAAAACTCCAAAGTCTGTTAAGTCGAATCTATCAAGTAATAAACAATATGGTTGGTCTGAAGAAGTGAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACTACACCATTAACAAGGAGCAGCAGCAATCCAGGTTCTGAGACACCTCGACAAGATGGAAAGAATACTAATGAACTTTCATTAGATCAACGCATCAAAAGAGTGTTGCTAGACGCAGACAATACAAGGTCTCCAATAGGATACAATGTAATTGGTGGTGACGCCTTAGGTATTCTTCTAGAACAGAAGTTGAAGGAATTGAATCAATTGACAAGTGGAGTTGAAACCTCTTCCATTACTGCACCAAAGTCAAATGATCAAGTAACCAACTTCAATATAGTTAACCTCAATCCAAGATCGGAGCAGAAGAAAGACCAAGATATGTCATTTACAGAAAGTTTAAGTGGTAGCCGTGGTTCTGACATGTCCTTCACCAATCTTCCAGAATCATCCTTGAAACATAAATCATGGGGTGATGAGATGGAACCATTGTCATTCAATTGCCGACAACCAAGTCCAATCTCAGTTCTTGAGCCTTCTTTTTCGATCGAAAGCTGTGAATCTTCGATAAGCGCAGACGTTACTAGTACAGAAGGAAGCAAAATGTTTTCGTCTCTTCAAGCCCAAGAAATTCATGGCTTTAATTTTTCAAGGAAGTTCTATCCAACTGAATGTGATGCAGAATTATCTGACTCAGCTTCTTCAACATCAACTAGGACTATGATGAAGAAGCAGAATAGTACATTTTCTGTGATGAAGTTCGGTAGATCATCAAGTACATGGGAGCTAGACTATGTGAAAGAGATACTATGTAATGTTGAGTTGATGTATATCGATTTTTCACTCGGTCGATCTCACGAAGTTGTTAACTCTCATCTCTTCAACCAGTTGGAAAGCCGAAAGGGAGGTTTCAAGAGTGACGATGAATCAAGAATAGAAAGGAAAGTTATATTTGATTGTGTGAGTGAATGTTTGGATTTGAGATGCAAAAGTTATGTAGGAGGAGGGTATAAAATGTGGATTAAAGGGTTTGAAATAGTGAAAAGAAAAGATTGGTTAGCAAATGATGTGTACAAGGAAATTTTGGGTTGGAAAGGGATGAGAGATTCAATGGTTGATGAACTTGTGGACAAGGATATGAGTAGTCAATATGGAAAGTGGTTGGAGTTGGATTATGAGGTTGATGCTTATGAATTTGGTGAAGAAGTTGCTGATCAAATATTTAATTCTTTGGTTGATGATGTTGTCTATGATATGTTGCAATTTTAA 2922 0.3915 MGVEKEGTKSGGSFFHLFDWTSKSRKKLFASKSDLPESLKHERKANHNVAMRHPYLVDEDENGVGEYVRGSCDNSYASSVTSDDTCGTRAPNVVARLMGLDSLPSSGFSDPYSTPYFETRSLQDSQFLYSGKLVEKVDGSSSNFVEPKPQKVITRPIEKFQREVLPPKSAKSIPVTHHKLLSPIKNPGFVPSNNAAYIMEAAARIIEPGSSQAKAKTHMAASSTVSLRVKDVRDKLDSSQKVPLITTSSVAFRTRELKEKRDISQRTSRVSERSQRSSVESNAAKYLKGQSLNRSWNGTPETSVKSPTNAEEDFSLKNKGKSVLSAETSVKSPTHAEEDFSLKNKGKSVSSAETSVKSPTHAEEDSTLKNKGKSVSLAIQAKVNVQRREGLSSTGGRNLMGQKEHVDIKSNQPLPKANAQKNLHRKSSGQNSSNVLRQNNLKQNHSNDNNDRLAPSKPLVSNSQGRKVTTGDSPYGRHRSSSSKSTAKSKVGSRKSAVEVTDSENEILYTSTNNFPRKKRTTDKDWNDRVVDNLFIDKTPKSVKSNLSSNKQYGWSEEVKKKDMDVVSFTFTTPLTRSSSNPGSETPRQDGKNTNELSLDQRIKRVLLDADNTRSPIGYNVIGGDALGILLEQKLKELNQLTSGVETSSITAPKSNDQVTNFNIVNLNPRSEQKKDQDMSFTESLSGSRGSDMSFTNLPESSLKHKSWGDEMEPLSFNCRQPSPISVLEPSFSIESCESSISADVTSTEGSKMFSSLQAQEIHGFNFSRKFYPTECDAELSDSASSTSTRTMMKKQNSTFSVMKFGRSSSTWELDYVKEILCNVELMYIDFSLGRSHEVVNSHLFNQLESRKGGFKSDDESRIERKVIFDCVSECLDLRCKSYVGGGYKMWIKGFEIVKRKDWLANDVYKEILGWKGMRDSMVDELVDKDMSSQYGKWLELDYEVDAYEFGEEVADQIFNSLVDDVVYDMLQF* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1100 973 MobiDBLite consensus disorder prediction 387 501 - -
Tpr5g1100 973 MobiDBLite consensus disorder prediction 573 594 - -
Tpr5g1100 973 Pfam Domain of unknown function (DUF4378) 813 965 IPR025486 -
Tpr5g1100 973 MobiDBLite consensus disorder prediction 670 693 - -
Tpr5g1100 973 MobiDBLite consensus disorder prediction 270 311 - -
Tpr5g1100 973 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 238 341 - -
Tpr5g1100 973 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 331 971 - -
Tpr5g1100 973 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 240 - -
Tpr5g1100 973 Pfam DUF761-associated sequence motif 78 109 IPR032795 -
Tpr5g1100 973 MobiDBLite consensus disorder prediction 573 597 - -
Tpr5g1100 973 PANTHER EXPRESSED PROTEIN 1 240 - -
Tpr5g1100 973 PANTHER EXPRESSED PROTEIN 331 971 - -
Tpr5g1100 973 PANTHER EXPRESSED PROTEIN 238 341 - -
Tpr5g1100 973 MobiDBLite consensus disorder prediction 413 494 - -
Tpr5g1100 973 MobiDBLite consensus disorder prediction 258 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1100 Tpr-Chr5 21931651 21936889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1100 373 971 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.016 2.82e-49 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1100 - - gmx:102669513 1262.28