Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1092 ATGTCAGCTATTATTGCAATGGCTGTGTTTGCCACAGCTCTAGCTATGTTACTCATTGCAGGAATTTTCCTTTACTTCTACCACAAATTTGTTCTTGCTAGATTCAAAAGTAGAAGAAACAAAGTTACTACTAGAGGTTTTGTTCATGAGATGAACCATTATGAAGATATAAAAAGATTTGGTGGTAATGTGAAAGGACTAATTGTTGAAGAAAATGGTGTTGATGTTATTTATATGATGGATAAAGAAAGTAGACAAATGATATCTAGATTTCCAAATTGTATGTTCAATCCTAGTTTTGAAGAAGATGAAGAAGAAAAAGAAAAGATAATAGATGTTTTGGTTCATAGGTCTAAAGTATCTAATCCTCATGAGATTCCATTTGCATGTGAATCTCCACTTCCACTTCCACCACTACAAAAATCTTCATCAATGAATCTTGAAAAGAAGATTCACATGAGTTATTATAATCAGCCACTACCTTCTCTCCCTCTTTCTCCTCCTCCACCACCACCTCCACCACCGGCTCCTGCAAAGAAAGAAATTCCGAAGGCACCACTTCGTCTACCGCTACCACCTGGTCCACCTCCACTTCTAAAGTCTAAAGGTTTTATTTCAACCATGAAACCACCAGCAAGACCTAAAGGAAAAGCAAATATGAAAGAGGGTATTGTAGGAGAGAGTTCAAGAGATAAAAGTGGTGGCCAAACAAGGCTCAAGCCTTTACATTGGGATAAGGTTGCAGCTGATGTTGATCATTCAACTGTGTGGGATCAGATCAATGATGGATCTTTTAGGTTTGATGATGAACTCATGGAATCGCTCTTTGGATATTCAAACACCTATCATAGAACCCAAGAAAGAAACAGGTCTCTTTCCAGTTTGTCCAAGTCCAATTCCAACACACAAACTCAAATATTCATCCTTGAGCCAAGAAAATCTCAAAACACTGCAATTGTGCTGAGATCACTAGCAGTTTCTCGGTGCGAAATCTTGGATGCAGTACTTGATGGTCAAGGACTCAGTGTTGAGACACTTGAAAAACTCACTAAAATAGCTCCCTCTCAAGAAGAAGCATCCAAAATTGTCCAATTCATTGGCAACCCAAATAACCTTGCAGAAGCCGAGTCTTTCCTATACTACATCCTTAAAGCAGTTCCAACATCATTCAACCATTTGAAAGCAATGCTTTTCAGATCGAATTACGATAGCGAAATTCTTCGGCTTAAAGAACACTTACACACACTTGACTTGGGTTGCAAGGAACTGAAAACTAGTAGTCTATTCTTGAAACTCCTTGAAGCAATTCTCAAAACTGGTAACAGAATGAATGCTGGAACTTCAAGAGGTAATGCACAAGGTTTCAACTTGAGTGCTCTTACAAAACTTTCTGATGTAAAAAGCACAAATGGAAAAACTAGTTTACTTCACTTCATAGTTGAACAAGTAGTTCATTCAGAGGGGAAAAGAAAAGCTATCTATGAAAAATACAATGATGAAAGTGAAAAAGAATATATAATCCTTGGTTTACAAGTGCTAAGTGGTCTAAGTAATGAATTATCAGAAGCAAAAAAAGCAGCTAGCATGCACTATAATAGTTTCATCACAATGTGTTCAACTCTTAGTTCTCATGTTAATGAAATTAGACACATTATAACATGTTGTGGAAACACTAACGGTGGATTTATCAATGAGATGAAAGGGTTTCTAGAGTTATGTGAGGAAGAACTTAAGGTGGTGAAAGAGGATCAAACAAGGATCATGGAACTTGTGAAGAAAACAAATGAGTACTATCTAGCAGGAACATCTAAAGACAATATGTCTAATCCTTTTCATTTGTTTGTTATTGTAAAAGATTTTGTTGACAAGGTAGGTCAAACTTGTATTGAACTAAAAAAGAAGGTAGAAAAGAAGAATGTAGGAATGGATTCTGTATCAACAACACCACCTTTGTCTCCATCAAAGAAGGTGCCACTGAGATTTCGTAGCATTGATTTCAATTTTCTGTCAAATAAGTTAGAGTTAGAGTCTACATTTTCCAGCCAGTCAGAAGATGACTTCTGA 2064 0.3663 MSAIIAMAVFATALAMLLIAGIFLYFYHKFVLARFKSRRNKVTTRGFVHEMNHYEDIKRFGGNVKGLIVEENGVDVIYMMDKESRQMISRFPNCMFNPSFEEDEEEKEKIIDVLVHRSKVSNPHEIPFACESPLPLPPLQKSSSMNLEKKIHMSYYNQPLPSLPLSPPPPPPPPPAPAKKEIPKAPLRLPLPPGPPPLLKSKGFISTMKPPARPKGKANMKEGIVGESSRDKSGGQTRLKPLHWDKVAADVDHSTVWDQINDGSFRFDDELMESLFGYSNTYHRTQERNRSLSSLSKSNSNTQTQIFILEPRKSQNTAIVLRSLAVSRCEILDAVLDGQGLSVETLEKLTKIAPSQEEASKIVQFIGNPNNLAEAESFLYYILKAVPTSFNHLKAMLFRSNYDSEILRLKEHLHTLDLGCKELKTSSLFLKLLEAILKTGNRMNAGTSRGNAQGFNLSALTKLSDVKSTNGKTSLLHFIVEQVVHSEGKRKAIYEKYNDESEKEYIILGLQVLSGLSNELSEAKKAASMHYNSFITMCSTLSSHVNEIRHIITCCGNTNGGFINEMKGFLELCEEELKVVKEDQTRIMELVKKTNEYYLAGTSKDNMSNPFHLFVIVKDFVDKVGQTCIELKKKVEKKNVGMDSVSTTPPLSPSKKVPLRFRSIDFNFLSNKLELESTFSSQSEDDF* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1092 687 MobiDBLite consensus disorder prediction 211 237 - -
Tpr5g1092 687 SUPERFAMILY Formin homology 2 domain (FH2 domain) 167 638 - -
Tpr5g1092 687 Gene3D Formin, FH2 domain 252 643 IPR042201 -
Tpr5g1092 687 PANTHER FORMIN-LIKE PROTEIN 4 679 - -
Tpr5g1092 687 ProSiteProfiles Formin homology-2 (FH2) domain profile. 229 650 IPR015425 -
Tpr5g1092 687 Pfam Formin Homology 2 Domain 235 623 IPR015425 -
Tpr5g1092 687 SMART it6_source 229 639 IPR015425 -
Tpr5g1092 687 PANTHER FORMIN-RELATED 4 679 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1092 Tpr-Chr5 21693067 21701255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1092 5 672 FH2 protein (formin) Gene Family AT1G70140 40.473 5.35e-149 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1092 - - gmx:100791689 835.484