Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1087 ATGAGTGGTAGTTCATCTAATAATCATATGCACAACATTGAAGAGAAACCTTCCTCTTCTCCCTCATCAACATTGAAGCTTTTTGGTTTCTCATTAACACCATCTAAAACCGTTCCTTGTCATAACAAGAAATTCATATGCCACTTCTGTCGCCGCGAATTTTCCAATTCTCAAGCATTAGGCGGCCATCAAAATGCTCACAAGAGAGAACGCCAAAGAGCGCATTTTCATTCCATTCTTCCACATCATCAACGCTTCGTACCATGTTCACCTTATCGTCCTATGATAGCACCACATGGAGCACCAAGAGTAGTGTTTTTGCATCCACGCCGCCAGTCACCGGATGCAATATGGAATAGACAACATTATGAAGAGGAGCCTAATGAGAATCCTTTGAATGCAACAACATCCACAAATAATGAACCTTCCATGCAAGTACACAATAATATTATTGATGGTGATGTTGATCTTAACTTGACTCTAGCTTGTGCACCTTTAAACTCCAAGGACAAAGAGTTTGGAAGGGAGTGA 531 0.4087 MSGSSSNNHMHNIEEKPSSSPSSTLKLFGFSLTPSKTVPCHNKKFICHFCRREFSNSQALGGHQNAHKRERQRAHFHSILPHHQRFVPCSPYRPMIAPHGAPRVVFLHPRRQSPDAIWNRQHYEEEPNENPLNATTSTNNEPSMQVHNNIIDGDVDLNLTLACAPLNSKDKEFGRE* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1087 176 SUPERFAMILY beta-beta-alpha zinc fingers 41 72 IPR036236 -
Tpr5g1087 176 ProSiteProfiles Zinc finger C2H2 type domain profile. 45 72 IPR013087 -
Tpr5g1087 176 MobiDBLite consensus disorder prediction 1 23 - -
Tpr5g1087 176 PANTHER ZINC FINGER PROTEIN 8-LIKE 12 163 - -
Tpr5g1087 176 ProSitePatterns Zinc finger C2H2 type domain signature. 47 67 IPR013087 -
Tpr5g1087 176 PANTHER ZINC FINGER PROTEIN 5 12 163 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1087 Tpr-Chr5 21665549 21666226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1087 19 98 C2H2 Transcription Factor Family AT1G67030 40.404 6.78e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1087 - - cam:101493460 194.512