Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1083 ATGGCCTCAATTGGTAACAATTTCTATTCCTCTTTAGGATGGTGTCAGTTTAACCAAGTGCTGAACATTGAACTGAGCCAAGTCATTGAGGGCACAAGCAGGCCAACACATTATCATGTTCTTTTGGATGAGATTGGCTTTTCCCCAGATGATTTACAGGAGTTTGTGCACTCGGTTTCTTATGTATATGGTGTGAGTCCATTTACGCCATTGAAAGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTTGCGATAACCAACATGGCTGAAAAAATGCCATCATTCAAGCATGGTGGAGCTTTATGGTTTGCTGATCTCTCAACTCCAGATGCCTTATACATTTTTCCAGTTTTAACTGCATTGTCATTCTTAGTAGTTGTAGAGGGAGCAAAGGAAAATGGCATCTCATTCTCATGCTCAGGCTTATAA 438 0.3995 MASIGNNFYSSLGWCQFNQVLNIELSQVIEGTSRPTHYHVLLDEIGFSPDDLQEFVHSVSYVYGVSPFTPLKGLFIQGPVFISFFLAITNMAEKMPSFKHGGALWFADLSTPDALYIFPVLTALSFLVVVEGAKENGISFSCSGL* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1083 145 Gene3D - 25 70 IPR036397 GO:0003676
Tpr5g1083 145 Pfam Piwi domain 27 66 IPR003165 GO:0003676
Tpr5g1083 145 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1-RELATED 52 135 - -
Tpr5g1083 145 PANTHER OXA1 52 135 IPR001708 GO:0016021|GO:0032977
Tpr5g1083 145 SUPERFAMILY Ribonuclease H-like 27 66 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1083 Tpr-Chr5 21612187 21616720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1083 29 64 Eukaryotic Initiation Factors Gene Family AT1G48410 52.778 1.64e-07 47.4