Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1076 ATGGCCTCAAACTTGTGTAGCTGCCGGTGCTTTTTCATCTTGGTTGTCTTATCAATCTTCACTGTAACCCCAGCAACATCTCAGCCACAAACCTCAGATTCATGCAACGGAATATTCCTGTCGTACGCATATAACAGAGGTGCAAAGCTACCGCCGAACGTGTCTGATCAGGTGGATCAACCGTACCGGTTTGAGTCGACACTAAGAGTGCTCAACAATGGACTGGTGGAGCTGAAGTCTTGGAAGGTATTCGTTGGGTTTCGGCACCAAGAGTGGTTGGTGTCGGCGTCCAATGCAGTCCTCGCCGACGGGAGAAGCATTCCAAACGCAGTTGGGAACGGGACCATATTTGCAGGATCTTCAGTAATTGATTTGAAGACAGCAGCAGCAACTGCAGGCGACTTAACGCAGATGCAGGTTCAGGTAGAAATGGTGGGGACAACATTAGGGGTTGCGCCACCAAGCGTTCCTATGCCTTCTACCATAAACCTTGCTAATGATGGATTCGTTTGTGGTGAACCCGCTTCTCAAGGGAACAATGAAACTCATGTATGTTGCAAAAGTGATCCCAATTTCAAGACAAAAATCACACCAAATGAAAAATTTCTACCTAGACAGAATGGTGATCTTACCATAATGTATGATGTGATCAAAGCATACAATTCCAATTATTGGGCAGAAGTAACAATTTCAAACCATAACACTCTAGGACGACTTGACAATTGGAAATTAAGCTGGAATTGGACAAATGATGAATTTATCCACACAATTAAAGGTGCTTATCCATCAACTATAGATTCTTCAAACTGTATTTTTGGTTCACAAAGTGAATTTTACAAGGAACTTGATTTTTCTAATGTATTGAATTGTGAAAAAAGACCAACAATAATTGATTTACCTCCAACAAGGTTCAATGATACACAACTTGGTAAAGTACCATTTTGTTGTAGGAATGGTACTATACTACCACCACATATGGACCTTAGCATGTCAATTTCAAGGTTCCAAATACATGTCTTTAAAATGCCACCAAATATCAATCGGTCAAACCTTATACCGCCACAAAATTGGGAGATTAAAGGTGATACGATTAACCCTGATTACAAATGCGGCGCCCCGATTAGGGTTAGTCCTAGTCAATCTCAAGATCCAACAGGGTTACCTTCAAACATATCTTCAATTGCAAGTTGGCAAGTTGTGTGCAACATAACTACAAAGTCATCATCAAAAAGTGATTCTCCTAAATGTTGTGTCTCATTTTCAGCTTATTATAATGAATCAGTTATTCCTTGTAATACATGTGCATGTGGATGTCCTAGTAATCAAGAGAGAACATGTAGTGCTAATACACCAGCTATGTGGCTTCCATCAAAAGCACTTCTTTTTCCATTTGAGAATAGAAGTGAAATAGCACATAAATGGGCTAGGTACAAAAATTTACAAGTACCTAACCCTATACCATGTGGTGATAATTGTGGTGTGAGTATAAATTGGCATGTAAACACAGATGATAAAAAAGGTTGGACTGCAAGGATCACAATTTTTAACTGGGGTGAGACGGATTTCGCCGATTGGTTTGCTGCGGTGCAAATGGACAAAGGTGCAGTAGGTTTTAAGGAAATGTATTCATTCAATGGAAGCTTATTAGAGAAATTAAACAATACAATATTCATGCAAGGTAAGAAAGGATTGAACTTTCTTGTAGCAGAAGCAAATGGGTCAAACCCTCAAAGAGATCCGAGGGTGCCTGGGAAACAGCAGTCGGTAATTTTGTTTACGAAGAAAAAAAAGGATGAAATCAATGTGGCTGGTGGTGATGGTTTTCCTAGTAAAGTGTTCTTCAATGGGGAGGAATGTTCTCTCCCTTCGGTGTATCCAAGCAATGGTTTGAGGAATGAATTTTCCTCGGTTACTATTACGATCCTAATATTGTTGTCAATCATCTTGATGCAACAATGGTGA 1962 0.4006 MASNLCSCRCFFILVVLSIFTVTPATSQPQTSDSCNGIFLSYAYNRGAKLPPNVSDQVDQPYRFESTLRVLNNGLVELKSWKVFVGFRHQEWLVSASNAVLADGRSIPNAVGNGTIFAGSSVIDLKTAAATAGDLTQMQVQVEMVGTTLGVAPPSVPMPSTINLANDGFVCGEPASQGNNETHVCCKSDPNFKTKITPNEKFLPRQNGDLTIMYDVIKAYNSNYWAEVTISNHNTLGRLDNWKLSWNWTNDEFIHTIKGAYPSTIDSSNCIFGSQSEFYKELDFSNVLNCEKRPTIIDLPPTRFNDTQLGKVPFCCRNGTILPPHMDLSMSISRFQIHVFKMPPNINRSNLIPPQNWEIKGDTINPDYKCGAPIRVSPSQSQDPTGLPSNISSIASWQVVCNITTKSSSKSDSPKCCVSFSAYYNESVIPCNTCACGCPSNQERTCSANTPAMWLPSKALLFPFENRSEIAHKWARYKNLQVPNPIPCGDNCGVSINWHVNTDDKKGWTARITIFNWGETDFADWFAAVQMDKGAVGFKEMYSFNGSLLEKLNNTIFMQGKKGLNFLVAEANGSNPQRDPRVPGKQQSVILFTKKKKDEINVAGGDGFPSKVFFNGEECSLPSVYPSNGLRNEFSSVTITILILLSIILMQQW* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1076 653 Pfam COBRA-like protein 224 404 IPR006918 GO:0010215|GO:0031225
Tpr5g1076 653 PANTHER COBRA-LIKE PROTEIN 7 1 651 - -
Tpr5g1076 653 PANTHER COBRA-LIKE PROTEIN 7 1 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1076 Tpr-Chr5 21501145 21503489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1076 35 626 COBRA Gene Family AT4G16120 62.521 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1076 - - mtr:MTR_2g034950 1158.28