Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1056 ATGGAAAAAAATAAAGCCACACCTCCATTTCGAGAAGAAATTGTGACTTCCTATTTCTCCATGTATGCGTTAGATGTGAATGTGGAAAGAGCGGAAGATGTTCATATGCATAAGAGATTACTACATTTAGCACATGATCCTGCTAATAGGCCTCAAATTGAAATTCGCTTAGTTCAGGCCCATCCATGCATGAAATCACCTTCTCAACAGATGACAAACCAAAGCTTCTCAGCCGAGGTGTGGTTGCTTCTGCAGTTAACTGCTTTGCTTGCTGAGGTTGGACTAAACATCCAAGAGGCACATGCTTTTTCCACAACTGACGGTTACTCGTTAGACGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAGAAGCTCAAAGAAACTTTGGAAAAAGAAGTCTTGAAGATTGAGAGACATGAGAGGTCCAGTCAGCAATCAATATCATCTGTTGATGAACGTGATCATAATAATTCTGAATTTTTTATTCGAAAACTTAAATTATATATATAA 516 0.3876 MEKNKATPPFREEIVTSYFSMYALDVNVERAEDVHMHKRLLHLAHDPANRPQIEIRLVQAHPCMKSPSQQMTNQSFSAEVWLLLQLTALLAEVGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETEKLKETLEKEVLKIERHERSSQQSISSVDERDHNNSEFFIRKLKLYI* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1056 171 ProSiteProfiles ACT domain profile. 71 146 IPR002912 -
Tpr5g1056 171 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 16 67 - -
Tpr5g1056 171 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 81 166 - -
Tpr5g1056 171 Coils Coil 121 144 - -
Tpr5g1056 171 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 67 - -
Tpr5g1056 171 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 81 166 - -
Tpr5g1056 171 SUPERFAMILY ACT-like 82 133 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1056 Tpr-Chr5 21104829 21111088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1056 22 163 MAP Kinase Kinase Kinase AT2G17700 38.889 2.56e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1056 - - oeu:111412131 129.028