Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1054 ATGTCTAGCTCATCGGAATTCTCAGAGGTTTCCGGCAACAAACCGGCGAGGTCACCGGAAAAGTTGACAACTTTCTCTCAAACTTGTAATTTGTTGAGTCAATATATTAAGGAAAAGGGTTGCTTCAAAGATCTTTCTCTTGGTATGACATGCAACACCGACCCAACTGGGTCTTCTGAGACATCTTCTCAATCTGCAACAACCATGAATTTGTTTCCTACCATGGAAAACAACTTGACACCAAAGAATCTTACAACTATGGATTTGCTCACTCCACAAGCTGCTTTGAACAATTCCAATGCTATTAAGGGGCCTAAAGCTGCACAATTGACAATGTTTTATAATGGTCAAGTGATTGTAATCGACGATTTTCCTGCTGATAAAGCCCATGAACTTATGGCTTTTGCTAACAAAGGAATTTCTCAAAGTCAGAACAATTCTGTGTACACATACACACAAAGCCAGCCTTCATTTCCTCCTAATTTGGTCCGAGCTTCGGTTGATTCAACCGCTCCAGTTACTACTATGAACATCATCCCTAATACTTCCACCGGTACTGGCCCTCAAGTACTTTCCAGACCTAATGTTTGCGATCTTCCAATTATGAGAAAAGCTTCGCTTCATCGGTTTCTTGAGAAGAGAAAGGATAGAGTTGCTGCCAAAGCACCATATCAAGTTAATAAACCAGCTGAATCCATGTCATGGCTTGTGGGTGCCAAATCAACTCAAATCTGA 735 0.4122 MSSSSEFSEVSGNKPARSPEKLTTFSQTCNLLSQYIKEKGCFKDLSLGMTCNTDPTGSSETSSQSATTMNLFPTMENNLTPKNLTTMDLLTPQAALNNSNAIKGPKAAQLTMFYNGQVIVIDDFPADKAHELMAFANKGISQSQNNSVYTYTQSQPSFPPNLVRASVDSTAPVTTMNIIPNTSTGTGPQVLSRPNVCDLPIMRKASLHRFLEKRKDRVAAKAPYQVNKPAESMSWLVGAKSTQI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1054 244 MobiDBLite consensus disorder prediction 1 20 - -
Tpr5g1054 244 PANTHER PROTEIN TIFY 10A 17 236 - -
Tpr5g1054 244 Pfam Jas motif 200 225 IPR018467 -
Tpr5g1054 244 ProSiteProfiles Tify domain profile. 103 138 IPR010399 -
Tpr5g1054 244 Pfam tify domain 105 137 IPR010399 -
Tpr5g1054 244 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 236 IPR040390 -
Tpr5g1054 244 SMART tify_2 103 138 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1054 Tpr-Chr5 21032024 21034435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1054 1 236 Tify Gene Family AT1G19180 39.326 1.45e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tpr5g1054 tify 3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1054 K13464 - gmx:100801449 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3476 2 38091550 38093332 Tpr5g1054 5 21032024 21034435 PCT