Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1051 ATGGCTTTAGCCATTTCATCCACTTCATTATCAAGTTTTCCAAACAGGGAAATATGTCAAAAGGTTTTCCACCAAGGAACGACAACAACAACCTCATGGTTAAGCAACAGCAACAGAAGAAGAAAACTTACAATTAGAAATGCAAAAAAAGGAGTGTCGGATGTTTGTGTACCACTCCCTCCAGATAGGCCATTGTGGTTTCCTGGTAGTTCACCTCCTGAATGGCTAGATGGCAGTCTTCCTGGTGATTTTGGTTTTGACCCTCTTGGATTAGGGTCTGATCCAGAGTTATTAAAATGGTTTGCACAAGCAGAACTAATGCATTCAAGATGGGCAATGTTAGGAGTATCAGGAATCCTCATCCCAGAAATACTCGACAATATGGGTTTCGTAAAAAACTTCTCATGGTATAATGCAGGTTCAGTCCAATATTTCGCAGACCCAACAACACTATTCATTGTTCAACTCGCTTTAATGGGTTGGGTCGAGGGTCGAAGATGGGCTGATATTGTTAATCCAGGTAGCGTTGATATTGAGCCCAAGTTACCAAATCGGCCTAACCCAAAACCAGATGTTGGTTATCCTGGCGGGCTTTGGTTTGATCCTATGCAGTGGGGAAGAGGTTCACCTGAGCCTGTTATGGTTTTGAGGACTAAGGAGATTAAGAATGGAAGACTTGCTATGCTTGCTTTTCTTGGATTTTGTTTTCAAGCTGTTTATACTGGTGGTAGTCCTCTTGAAAATTTGACGGCTCATCTTGCTGATCCCGGTCATGTCAACATTTTCTCGGCTTTCACTTCAGGGTAG 807 0.425 MALAISSTSLSSFPNREICQKVFHQGTTTTTSWLSNSNRRRKLTIRNAKKGVSDVCVPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHSRWAMLGVSGILIPEILDNMGFVKNFSWYNAGSVQYFADPTTLFIVQLALMGWVEGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAVYTGGSPLENLTAHLADPGHVNIFSAFTSG* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1051 268 Pfam Chlorophyll A-B binding protein 72 238 IPR022796 -
Tpr5g1051 268 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 265 - -
Tpr5g1051 268 Gene3D Chlorophyll a/b binding protein domain 73 258 - -
Tpr5g1051 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Tpr5g1051 268 SUPERFAMILY Chlorophyll a-b binding protein 62 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1051 Tpr-Chr5 20926294 20929567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1051 56 266 Chloroplast and Mitochondria Gene Families AT3G61470 65.877 4.36e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1051 K08908 - gmx:100800374 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1051 5 20926294 20929567 Tpr5g1051 5 20926294 20929567 ECH