Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1050 ATGGCCGCTGCTTCTGTTCTCCTTTTGATCTCTCTTTCCTTTCTTTTTCTGATCTCCAGCGCGGCGCAACCACAATCAGAAACACAATCTCTCCTAAAACTAAAACAATCCTTCACAAATTCCGACAAAATATTATCCTCATGGATCCCCAATGTCTCTCCATGTTCCGGCACATGGGTTGGCGTTATCTGCTTCAGCAACATTATCACAGGTCTCCATCTCACCGACCTCAGCCTCTCCGGAACAATAGATGTCGATGCCATTGCCGAGATTCGCGGCTTAAGAACACTCAACTTTATCAATAACTCTTTTTCTGGTCCTATTCCCCAGTTCAACAAACTTGGCACCATCAAATCTCTTCTTCTCCAACAAAACCAATTCACCGGTCCAATTCCGCAAGATTTCTTCACAAAATTAAGTTCTTTGAAAAAAGTATGGCTCTCTGGTAACAAATTCTCCGGCAATATTCCGGTTTCTTTAACGGAACTTGATCTCCTCAAAGAATTGCACCTTGAAGGTAACCAATTCTCCGGTCAGCTACCGGATCTCAAACAAGATTTCAAATCATTCGATGTTTCGAATAACCAACTAGAAGGTCCTATCCCTGAAAGTCTTGCGAAATTTAGTGCTGTTTCGTTTGCCGGAAATGCAGGCCTGTGTGGAAAACCGTTGGAAAAGCAATGTGACGGTTCATCTTCTTCTTCTTCTTCTTCTACTACTTCTTCTTCATATTTGGATAGTGTTACTTATGCTCCAACCGAAAATGGTGCGTCTGGTTTGGCGTCTAAAGTGATGGTACTTATGTTATTGGCAGTTTTAGCGGCGGTTATACTTTTATTTTTGAAATCAAGGCAGAGAAGACGGGACGATGATTTTAGCGTTGTAAGCCGAGACTCTAGCGTTGACGAGGTGCAGGTGCGTGTACCGATAAGTAGAGCTTCTTCCGCGTCAGAGAGAGTTGGGAGACGGAACGTGGGGGAATCTACAAAGAGAAGCGGAATGGGGGCTGGAAATAGAAATGGTATAGGTGATTTAGTGATGGTGAATGATGAGAAGGGTACCTTTGGTTTGCAGGATTTGATGAAAGCTGCTGCTGAGGTATTGGGGAATGGTGGATTGGGTTCGGCTTATAAAGCCGCTATGTCGAGTGGGTTGAGTGTGGTTGTCAAGAGGATGAGGGAGATGAATAAAATTGGGAAAGATGTGTTTGATGCTGAAATGAGACAATTTGGGAGGATTAGACATCCTAATATTTTGACGCCTTTGGCTTATCATTATAGGAGAGAGGAAAAGCTTTTCGTTACCGAGTATATGCCTAAAGGAAGCTTGTTATATGTCTTGCACGGTGACAGAGGAACTTCCCATGCAGATTTAACATGGCCTATCCGTTTAAAGATTGCTAAAGGAATTGCAAGAGGGTTAAGCTTCCTTTACTCTGAATTTTCAACCTATGATTTACCTCATGGAAACCTTAAATCAAGCAATGTTCTACTAACTAATGAATATGAGCCACTTTTAGGTGATTTTGCTTTTCAACCACTAATCAATCCTAGCACTGCAGTACAATCAATGTTTGCATACAAAACACCAGATTACATTCAAAACCAGAAGCTTTCGCAGAAAGCCGATGTTTATTGCCTTGGAATCATCATTCTCGAAATTATTACAGGGAAATTCCCTTCTCAGTATCATAGTAATGGTAAAGGTGGGACCGATGTTGTTCAATGGGTCCTCACAGCGATTTCTGAGCGACGAGAAGCTGAATTAATTGATCCTGAGTTGAAAGATAATGCATCAAATTCAATCAATAATATGCTTCAGCTTCTCTTAATCGGTGCTGCTTGTACCGAAAGCAACCCGGAACAAAGAGTGCATATGAAGGAAGCTATTAGAAGGATAGAGGAGGTACAACTCTAA 1917 0.4189 MAAASVLLLISLSFLFLISSAAQPQSETQSLLKLKQSFTNSDKILSSWIPNVSPCSGTWVGVICFSNIITGLHLTDLSLSGTIDVDAIAEIRGLRTLNFINNSFSGPIPQFNKLGTIKSLLLQQNQFTGPIPQDFFTKLSSLKKVWLSGNKFSGNIPVSLTELDLLKELHLEGNQFSGQLPDLKQDFKSFDVSNNQLEGPIPESLAKFSAVSFAGNAGLCGKPLEKQCDGSSSSSSSSTTSSSYLDSVTYAPTENGASGLASKVMVLMLLAVLAAVILLFLKSRQRRRDDDFSVVSRDSSVDEVQVRVPISRASSASERVGRRNVGESTKRSGMGAGNRNGIGDLVMVNDEKGTFGLQDLMKAAAEVLGNGGLGSAYKAAMSSGLSVVVKRMREMNKIGKDVFDAEMRQFGRIRHPNILTPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTSHADLTWPIRLKIAKGIARGLSFLYSEFSTYDLPHGNLKSSNVLLTNEYEPLLGDFAFQPLINPSTAVQSMFAYKTPDYIQNQKLSQKADVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVLTAISERREAELIDPELKDNASNSINNMLQLLLIGAACTESNPEQRVHMKEAIRRIEEVQL* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1050 638 Gene3D Ribonuclease Inhibitor 188 231 IPR032675 -
Tpr5g1050 638 Pfam Protein kinase domain 366 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1050 638 Gene3D Transferase(Phosphotransferase) domain 1 438 638 - -
Tpr5g1050 638 Gene3D Phosphorylase Kinase; domain 1 337 437 - -
Tpr5g1050 638 PANTHER LRR RECEPTOR-LIKE KINASE 6 638 - -
Tpr5g1050 638 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 638 - -
Tpr5g1050 638 SUPERFAMILY Protein kinase-like (PK-like) 366 634 IPR011009 -
Tpr5g1050 638 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Tpr5g1050 638 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Tpr5g1050 638 SUPERFAMILY L domain-like 25 208 - -
Tpr5g1050 638 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Tpr5g1050 638 ProSiteProfiles Protein kinase domain profile. 362 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g1050 638 MobiDBLite consensus disorder prediction 314 336 - -
Tpr5g1050 638 Coils Coil 626 638 - -
Tpr5g1050 638 CDD STKc_IRAK 368 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1050 Tpr-Chr5 20922254 20925061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1050 4 638 Receptor kinase-like Gene Family AT3G42880 49.615 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr5g1050 Pkinase 2.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1050 - - gmx:100790660 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3474 2 38076988 38080036 Tpr5g1050 5 20922254 20925061 PCT