Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1020 ATGGCATCTGATTCAAACGCCACCAACACACTTCAGGCAATTCGCTACAACCGCGGTTCTCTTCAGCTTCTCGACCAGAGGAAGCTTCCTCTAGAAAGTGTTTACTTGGAAATTCGGGATTCAAATGATGGCTGGAATGCTATACAAGATATGGTGGTCCGGGGAGCACCTGCTATTGCTATTGCAGCTGCACTCTCACTGGCTGTGGAGGTATCCAATTTAGAAGATTTCAACGGGTCTACTGATGACGCTGTTTACTTCCTGCAGAAGAAGTTGGAATATCTTGTCTCGAGCCGGCCAACTGCAGTGAACTTATCAGATGCTGCGACAAAACTCAAAGAAATAATTTCTAAGGCAGCTGCTACCACTTCAGAGGCCAAAGGTGTTTTTCAGGCTTATCTAGAGGCTTCTGAAATAATGCTTGAGTATGATGTTGCATCGAACAGAGCAATTGGAACATATGGAGCTAGTGTTATTCAAAACCAAACAGAAAAACAGAAGCTCTCTGTTTTGACCCATTGCAACACCGGAAGTTTAGCCACGGCTGGATATGGTACTGCTCTTGGTGTTATCCGTGCACTTCACAGCGGGGGAGTTTTAGAAAGGGCTTATTGCACAGAAACACGCCCATTCAATCAAGGATCCAGACTTACTGCGTATGAGTTGGTACATGACAAAATACCTGCAACTCTTATAGCAGATTCTGCTGCAGCTGCATTAATGCAAGCAGGACGTGTGGATGCTGTTGTTGTTGGCGCAGATCGTGTTGCCTCAAACGGTGACACAGCCAACAAAATTGGAACCTATAGTGTTGCCTTATGTGCCAAGTTTCATAATGTACCTTTTTATGTGGCTGCACCCTTAACTTCCATTGATCTATCACTTTCTTCTGGAAAACAAATTGTCATTGAGGAGAGATCTCCCAAGGAATTGTTGAATACACGTGGAGGACTGGGAGAGCAGGTTGCTGCCTCAGGAATATCTGTGTGGAATCCGGCTTTTGATGTTACACCGGCAAATCTAATATCTGGGATCATCACTGAGAAGGGTGTTATTACAAAGACATCTGCTGGTGATGCTTTCGACATAAAAGCTTTTGTACAAAAAACAAGTTAA 1116 0.4418 MASDSNATNTLQAIRYNRGSLQLLDQRKLPLESVYLEIRDSNDGWNAIQDMVVRGAPAIAIAAALSLAVEVSNLEDFNGSTDDAVYFLQKKLEYLVSSRPTAVNLSDAATKLKEIISKAAATTSEAKGVFQAYLEASEIMLEYDVASNRAIGTYGASVIQNQTEKQKLSVLTHCNTGSLATAGYGTALGVIRALHSGGVLERAYCTETRPFNQGSRLTAYELVHDKIPATLIADSAAAALMQAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLSLSSGKQIVIEERSPKELLNTRGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKTSAGDAFDIKAFVQKTS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1020 371 Pfam Initiation factor 2 subunit family 53 353 IPR000649 GO:0044237
Tpr5g1020 371 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 9 368 - -
Tpr5g1020 371 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 11 363 IPR005251 -
Tpr5g1020 371 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 12 354 IPR005251 -
Tpr5g1020 371 Gene3D - 201 366 IPR042529 -
Tpr5g1020 371 Gene3D - 9 200 IPR027363 -
Tpr5g1020 371 SUPERFAMILY NagB/RpiA/CoA transferase-like 8 356 IPR037171 -
Tpr5g1020 371 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 39 354 IPR011559 GO:0044249
Tpr5g1020 371 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 9 368 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1020 49 371 Eukaryotic Initiation Factors Gene Family AT2G05830 76.543 4.35e-173 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1020 K08963 - gmx:100799311 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1020 5 20347688 20354870 Tpr5g1020 5 20347688 20354870 ECH