Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1010 ATGGTTGGACTACCATATGTGGATAACAGGGAAAATATATTGAGGACCCTTTTGGCTAAAGAGAAGGTGGATGATGGACTTGATTTTAAGGAACTTGCAACTATGACAGAAGGATACAGTGGAAGTGATCTAAAGAACATATGCGCAACTGCTGCTTATAGGCCTGTTAGAGAGTTAATTCAACAAGAGTGGAGGAATTCCACATTGCTTTTTACAGTTTGGTCCTGGTGCAATTCAGCAGGCCTTCTTTTTAGTGTGCAATGTACTTTGTTGGGTAAAATTATGGTAATACTTTGGACAAATAAATGTGTGGAGTATATATCTTGA 327 0.3823 MVGLPYVDNRENILRTLLAKEKVDDGLDFKELATMTEGYSGSDLKNICATAAYRPVRELIQQEWRNSTLLFTVWSWCNSAGLLFSVQCTLLGKIMVILWTNKCVEYIS* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1010 108 Gene3D - 3 72 - -
Tpr5g1010 108 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 73 - -
Tpr5g1010 108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 62 IPR027417 -
Tpr5g1010 108 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 73 - -
Tpr5g1010 108 Pfam AAA+ lid domain 27 65 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1010 Tpr-Chr5 20046980 20048602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1010 2 63 Calmodulin-binding Proteins AT3G56690 38.710 2.25e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1010 - - nta:107830164 114.39