Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1009 ATGGATTTCTATAGAGAATTTCCTTATCCTACTGCGAAGGATTTTGAAGTCATAAAATGCTACTTAGACGCCGAAGTTGAGTTTATGCCAAAAGCAAACTTCTACAATGACGATCAAAACATTCTAATTCGAAGAAATGCTGTTTCGATGATCGCCAAGCTCACAACTAAGGAATTCATGGACTGGTTTGATCCGGATGCTTATGTTCCGTATATTGCAATGAACTACTTTGATCGCTTCGTGTCCCATTTCGGCATGAAGTACGTGGAAGGCCAGACCATGACAGAAAAAGTTAATCTGATTGCTATATCTTGTTTCACCATATCTGCCAAGATGAGAGTAGACTCGTTTGAATACTGTTGTTGGTTTCTTCAAAGGGTCATGAAAAATCTTGGAATAAAGAGTGTTATGGTTATGAAAACGGAGCTTGTCATTCTCCAAGCACTTAAATGGAGAATGAAACCCGTGACTCCCGACTGTTTTCTAAACTCCTATTACCCTTGCTTCAAAGATTTCGGTGGTTTTAATCGCCGTAGCATTAATGAGATCATAGTTCAAGCTCAAGGAGAGCACACTTTTGTTGATTTTATGCCGTCTCAAATTGCACTCTCCGCTCTTCTGGCCGCTTCCAAACTTGCATATCCTTTGCATAAGGAAAAGATTGAAAGAATCAAAAGCAATGATAAAGTGTATCTATCATCATCTAATGTCAATCTAATTTCATATAACAAGGCTTACTTACAGTTTACCATAGTGAAGGACTGTGCAAAAAAGATGATAGATCTTTGCAGAAGAATGAACATCAGGATTGACACCCCTGGATCTTTGCAGATGATAGATGGGACTGTGGTCGACATGAAAAAACTGGATATAGGCAAGATGAAGACTTCTCAATTGCAGGTGCAGGAGGAGCCGGAGAAGTTATATGATAAAACACCAAAGAAGCCACTGAACTTTGAGTTGAAGTGGGTGCAGCCACAATAA 984 0.3933 MDFYREFPYPTAKDFEVIKCYLDAEVEFMPKANFYNDDQNILIRRNAVSMIAKLTTKEFMDWFDPDAYVPYIAMNYFDRFVSHFGMKYVEGQTMTEKVNLIAISCFTISAKMRVDSFEYCCWFLQRVMKNLGIKSVMVMKTELVILQALKWRMKPVTPDCFLNSYYPCFKDFGGFNRRSINEIIVQAQGEHTFVDFMPSQIALSALLAASKLAYPLHKEKIERIKSNDKVYLSSSNVNLISYNKAYLQFTIVKDCAKKMIDLCRRMNIRIDTPGSLQMIDGTVVDMKKLDIGKMKTSQLQVQEEPEKLYDKTPKKPLNFELKWVQPQ* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1009 327 SUPERFAMILY Cyclin-like 11 153 IPR036915 -
Tpr5g1009 327 Pfam Cyclin, N-terminal domain 16 153 IPR006671 -
Tpr5g1009 327 Gene3D - 18 214 - -
Tpr5g1009 327 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 10 269 - -
Tpr5g1009 327 PANTHER CYCLINS 10 269 IPR039361 -
Tpr5g1009 327 Gene3D - 31 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1009 Tpr-Chr5 20040979 20042655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1009 1 216 Core Cell Cycle Gene Families AT4G03270 29.167 2.15e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1009 - K18812 aprc:113855478 213.001