Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0993 ATGTTTCCTTTCATGAGTATGAGTCATTTAGACTTTTTGCTTAGTTGGGATGTGAATTTCTTACCAAAATTAAGTTTTTGTTTTTCTTCATATTTTTTTGGAAACACCAAAATGGCGTCTGATCTAAATTCAGGGTTGTCAAAGAAAACATTTGTTTTCGGATTGAAAGTTTGGGTATTAATGGGAATTATTGTTGGTTTGTTCATTATAATCATTCTTGCGGTGCTATCAATATGTCTTACTTTAAGAAAGAAATCGAGAAGAGGCAACGGTGGCATGCGTCCTCTTAGCCATATTCTGTCTATTTCAGAAGAGATCAAAGAAATTAGTGTCGATCAAGTTTCATCGAATAATCATCCGCAAAATGGTTCTTTCATGAGCTTGAATGACAAGTTTAGTGATGGCGATTCCGGAAAGGTTTTGATCCAGACAAAGAATGGAGATAATAGTAGTCAATCAGGCTCGTTTAATCGTTTAGAGAAAGATCCGAGTGGTTCTCAGTCAGGTGAAGATAGTGGCGGTTTTAGGAGCATTTCAGCTTATAGGTCTTCGTCGCATCCTATATCTGCACCATCACCATGTTCTGGTCTTCCTGAATTCTCTCACCTTGGCTGGGGTCACTGGTTTACACTAAGGGACTTGGAACTTGCAACTAACAGGTTTTCGAAAGACAATATTATCGGTGAAGGTGGTTATGGAGTTGTCTATCGAGGTCAACTTATCAATGGGAATCCTGTTGCCATTAAGAAGCTCCTCAATAATTTAGGACAAGCTGAAAAGGAATTTAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTTTAGGCTTTTGCATTGAAGGAACTCACAGGTTATTGATTTATGAGTATGTTAACAACGGCAATTTAGAGCAGTGGCTTCATGGAGCCATGCGGCAGCATGGATATCTTACTTGGGAAGCTCGGATAAAAATTCTTCTTGGAACAGCCAAAGCGCTTGCTTACTTGCACGAGGCGATTGAGCCAAAAGTTGTACATCGAGATATTAAGTCGAGCAATATTTTAATTGATGATAGCTTTAATGCAAAAATATCTGACTTTGGGCTTGCTAAGTTACTTGGTGCTGGAAAAAGTCACATTACAACTAGAGTAATGGGTACTTTTGGATACGTAGCTCCAGAATATGCGAATTCTGGCTTGTTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTATTGCTTCTTGAAGCAATTACAGGAAGAGATCCAGTCGATTATAGCCGATCAGCAGCCGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTAGGGTGTAGGCGCTCAGAAGAGGTGGTGGACCCTAATATTGAGACTAGGCCATCGACTAGTGCCCTAAAACGATCCCTTTTAACTGCTTTGAGGTGTGTTGATCCAGATTCTGAAAAAAGACCAAAGATGAGCCAAGTTGTTCGCATGCTTGAATCAGAGGAATATCCTATACCTCGAGAGGATCGTAGACGGCGAAAGAGCCAAGCAGGAAACATAGAGGTAGAGAGCCAGAGGGAGACTTCAGATACAGATAAGAGTGACAATCCAGATCATAAACCAAATGGCAGAACAAACCAACACATGTAG 1632 0.4044 MFPFMSMSHLDFLLSWDVNFLPKLSFCFSSYFFGNTKMASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIIIILAVLSICLTLRKKSRRGNGGMRPLSHILSISEEIKEISVDQVSSNNHPQNGSFMSLNDKFSDGDSGKVLIQTKNGDNSSQSGSFNRLEKDPSGSQSGEDSGGFRSISAYRSSSHPISAPSPCSGLPEFSHLGWGHWFTLRDLELATNRFSKDNIIGEGGYGVVYRGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDSFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRSAAEVNLVDWLKMMVGCRRSEEVVDPNIETRPSTSALKRSLLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSQAGNIEVESQRETSDTDKSDNPDHKPNGRTNQHM* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0993 543 MobiDBLite consensus disorder prediction 146 174 - -
Tpr5g0993 543 SMART serkin_6 221 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0993 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 343 355 IPR008271 GO:0004672|GO:0006468
Tpr5g0993 543 CDD STKc_IRAK 227 493 - -
Tpr5g0993 543 ProSiteProfiles Protein kinase domain profile. 221 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0993 543 Gene3D Transferase(Phosphotransferase) domain 1 297 509 - -
Tpr5g0993 543 Gene3D Phosphorylase Kinase; domain 1 203 296 - -
Tpr5g0993 543 PANTHER RECEPTOR-LIKE KINASE PLANT 39 543 - -
Tpr5g0993 543 Pfam Protein kinase domain 222 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0993 543 PANTHER OS01G0323000 PROTEIN 39 543 - -
Tpr5g0993 543 SUPERFAMILY Protein kinase-like (PK-like) 205 501 IPR011009 -
Tpr5g0993 543 MobiDBLite consensus disorder prediction 477 543 - -
Tpr5g0993 543 ProSitePatterns Protein kinases ATP-binding region signature. 227 250 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0993 Tpr-Chr5 19741910 19746765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0993 54 495 Trihelix Transcription Factor Family AT1G70460 41.071 1.51e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tpr5g0993 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0993 - - gmx:732653 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3557 2 38744480 38748906 Tpr5g0993 5 19741910 19746765 PCT