Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0992 ATGATATTTAGTTCTCAAGAAGTTACCAAATATTACAAGAATTATGCTAGGTGTATGGGTTTTGGAGTTAGTAAAATCAGTTCAAAAAATGGAGATGATGGAAAAAGATACTTTACTCTAGGATGTAGTCGTGCAAGAAGCTACGTGAGTAATTCAAAAAACCTTTTAAAGCCAAATCCTATCACAAAATCACAATGTAAGGCTAGAGTAAATGTGTGTGTGTCTTTAGATGGAACAGTTACAATTTCAAGAGTTTCTCTTGAGCATAATCATGAATTAAGCCCAAGCAAATCAAGATATTTTAGATGCAACAAGAATCTAGATCCTCATATAAAAAGAAGTTTGGAGCTTAATGATCGAGCTGGGATAAATGCACAACATCATATAAATGATCGCCCATTATCATGA 408 0.3309 MIFSSQEVTKYYKNYARCMGFGVSKISSKNGDDGKRYFTLGCSRARSYVSNSKNLLKPNPITKSQCKARVNVCVSLDGTVTISRVSLEHNHELSPSKSRYFRCNKNLDPHIKRSLELNDRAGINAQHHINDRPLS* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0992 135 PANTHER - 3 115 - -
Tpr5g0992 135 Pfam FAR1 DNA-binding domain 10 94 IPR004330 -
Tpr5g0992 135 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 115 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0992 Tpr-Chr5 19737753 19738457 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g0992 FAR1 1.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0992 - - cam:101506732 164.466