Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0990 ATGGATATGTACATTCGCATTAAGCGTGATAAGACAACATATTTCATCCGGTGTAAGCCATCTGACAAAATTCTTGACATAAAGGAGAAATTACAAGAACTAATCGATCAACCTGTTAATGACCAACGGTTAATTCTACCTGGTACTGGCGAAGTATTAGAGGACGCTAAGACTCTGGCTGATCAAAAGATTGAAACTGATGCTGTTGTTGCACTGACCTTGAGGAAAGATGATAATGAGTTTGAGGAAGTCAACATTGTTCGACCAAATGATTTCTATCAGACAAGGGATGCAGAGGGTGGCAATTGGTGA 312 0.3974 MDMYIRIKRDKTTYFIRCKPSDKILDIKEKLQELIDQPVNDQRLILPGTGEVLEDAKTLADQKIETDAVVALTLRKDDNEFEEVNIVRPNDFYQTRDAEGGNW* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0990 103 Pfam Ubiquitin family 5 76 IPR000626 GO:0005515
Tpr5g0990 103 PANTHER OS03G0364000 PROTEIN 1 100 - -
Tpr5g0990 103 ProSiteProfiles Ubiquitin domain profile. 1 79 IPR000626 GO:0005515
Tpr5g0990 103 SMART ubq_7 3 75 IPR000626 GO:0005515
Tpr5g0990 103 Gene3D - 1 92 - -
Tpr5g0990 103 SUPERFAMILY Ubiquitin-like 1 79 IPR029071 -
Tpr5g0990 103 PANTHER OS03G0364000 PROTEIN 1 100 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0990 1 75 Cytoplasmic Ribosomal Protein Gene Family AT1G23410 34.667 7.31e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0990 K03873 - gmx:100499885 190.274