Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0956 ATGTTTAACTTGCACAATGAAGACGTTTCTAAGTTGCGATTTGGTAATTTGGAAGTTGCATACAAATTTTACTGTTGGTTTGCAAAGATGAACGGTTTTGCTGTTCGCAAAGGGCAAGATGTTAGAAATAAAGATGGAGTTCTTGTTCAAAAAACATTCGTTTGTAACCTAGAAGGCTACAGGAAAGACCGTCGCGATTTAACTGAAGTGACGCGCAAGCGTGGTCCGAAACACGAAACCAGGTGTGGTTGCAGTGCAAGACTTCGAGTGCATATTGATATAATTTCGGGTCTCTGGTACATTACTATTTTCATTTTTGAGCACAATCATTATATGTTGACGGAGAAGCACTGTGGGCTATTGGCAGCACATAGGAAACTTACAAAATCAGATCAGATTCAAATTAAGAACTATGGTCAAGCTGGGATAAAGGTTGCTCAAATGATCGGTGCGTTTGCCAATGCTGCGGGAGGGTATGATAAGGTAGGGTTTTTGAAGAAGGATTTGCACAATCAAATTCAAAGACAAAGAAAAGAAACGTCTTCTGATGCTAAAGGTGTTGTTAAGTACCTTCTAGGTCTTAGGACTAAAGATCCATTGATGTTCGTTGCACACACGGTCGATGCTTGTGGTAGGTTGCAAAGCTTATTTTGGTGTGATGGAGAAAGCCAAAAGAATTATGAGGTTTTTGGTGATGTGTTGGCATTCGATGCTACATATAACAAAAATAAATACAGGTGCCCGTTTGTTGTATTTTCCGGTGTCAACCACCATAATCAGACAATTATCTTTGCCACTGCTGTAGTTTCTAATGAGGTTGAAGGCACATATGTGTGGTTGTTGGAGCAATTTTTGCTTGCGATGAAAGGCAAGGCCCCTGTTTCTGTAATAACAGACGGTGATGTAGCTATGAGGAATGCAATAAGGAGAGTATGTCCTAATAGTTATCATAGGTTATGTGCTTGGCATCTTCTTCGAAATGCCATGTCTAACATTGGTAACCTAGAGTTCATTCCATACTTGAAAAAATGCATGCTTGGCGATAACGATGTTTGGAAATTTGAGAAACTGTGGAATGAAATGATAGATAAGTTTGGGCTTCAAGACAACAGTTGGATCAAAGAATTGTACCAGAAAAAGAAGATGTGGTCAACAGCCCATATTAGGGGGCATTTTTTTGCAGGAATACGAACGACGTCGCGGTGTGAAGCATTTCACAGTCACATGGGTCAGTTTGTCCACTCAAAGATGAATATGACTGATTTTGTGAAGCAGTTTAATAGATGTGTATGTTATTTTCGCTTCAGGGAGGTGGAGGCGGATTTTCATTCACAATATGGAAATGCTGTCTTGCAGACCCCTCTAAGGTCACTCGAGAGGTCTGCATCAAAACAATTCACACATGAGATTTTCTGCTTGGTACGTTCTGTACTAAAAAAGGTTTCCCTGATATCATTATGTGACACTCAAGAGATGGCATCCTTTTCAATTTATTCTGTGACGAAGTATCAAGACGAAGGACATGTTTGCCGTGTATCTCACAGTCCATCAAACAATGAATTTAAATGTTCTTGTCTTAGAATGGAATCAATTGGAATTCCTTGTGAACACATCGTGGCAATTATGGTATATCTTGATACTGTTGAATTCCCGACTAATCTTGTGTTGAATCGATGGTCTAAATTTGCAAAGGACTCAATTCGTGGTAATGTTAACGATGGTTCACATTACTGGGATTCACATTTGGTTGCGAGACATGCCAATTTGGTGCATCTTAGCAAGGAAGTTTCCGATTTGGCTTACAAGGATGTTGATGATTATAAAAACTATTTGGATTATCTAACCAATGAAATCACGAGGCTTAAATCAAAGTACGTTGGTGATAACGGTCCTGTGAATTTAAATGGTCCGGTCGAAGTTGATAACATATTGAACCCTTCCTGTGCAAGAAGCAAAGGCGGTGGACCCAGTTCCAACAACACTACAGCTGGGAGAAGCAGGCGTCCAGGAACATGTGGCGGATGCTCCCAAGTTGGACACAACATAAGATCTTGTCCTAACCTGGCTGAAGATGGAGAATTTCCTGCAGCCAGTTCTGTTCAATCAATGTCTGTACGGTTAAGCGGTAACAATTACGAAGGCTACGTCAACACCAGATAG 2160 0.4042 MFNLHNEDVSKLRFGNLEVAYKFYCWFAKMNGFAVRKGQDVRNKDGVLVQKTFVCNLEGYRKDRRDLTEVTRKRGPKHETRCGCSARLRVHIDIISGLWYITIFIFEHNHYMLTEKHCGLLAAHRKLTKSDQIQIKNYGQAGIKVAQMIGAFANAAGGYDKVGFLKKDLHNQIQRQRKETSSDAKGVVKYLLGLRTKDPLMFVAHTVDACGRLQSLFWCDGESQKNYEVFGDVLAFDATYNKNKYRCPFVVFSGVNHHNQTIIFATAVVSNEVEGTYVWLLEQFLLAMKGKAPVSVITDGDVAMRNAIRRVCPNSYHRLCAWHLLRNAMSNIGNLEFIPYLKKCMLGDNDVWKFEKLWNEMIDKFGLQDNSWIKELYQKKKMWSTAHIRGHFFAGIRTTSRCEAFHSHMGQFVHSKMNMTDFVKQFNRCVCYFRFREVEADFHSQYGNAVLQTPLRSLERSASKQFTHEIFCLVRSVLKKVSLISLCDTQEMASFSIYSVTKYQDEGHVCRVSHSPSNNEFKCSCLRMESIGIPCEHIVAIMVYLDTVEFPTNLVLNRWSKFAKDSIRGNVNDGSHYWDSHLVARHANLVHLSKEVSDLAYKDVDDYKNYLDYLTNEITRLKSKYVGDNGPVNLNGPVEVDNILNPSCARSKGGGPSSNNTTAGRSRRPGTCGGCSQVGHNIRSCPNLAEDGEFPAASSVQSMSVRLSGNNYEGYVNTR* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0956 719 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 619 IPR031052 GO:0006355
Tpr5g0956 719 PANTHER OS02G0262500 PROTEIN 10 619 - -
Tpr5g0956 719 MobiDBLite consensus disorder prediction 648 672 - -
Tpr5g0956 719 MobiDBLite consensus disorder prediction 651 667 - -
Tpr5g0956 719 Pfam SWIM zinc finger 522 542 IPR007527 GO:0008270
Tpr5g0956 719 Pfam MULE transposase domain 233 327 IPR018289 -
Tpr5g0956 719 Pfam FAR1 DNA-binding domain 22 113 IPR004330 -
Tpr5g0956 719 ProSiteProfiles Zinc finger SWIM-type profile. 498 546 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0956 Tpr-Chr5 18786901 18789060 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g0956 MULE 6.7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0956 - - ccaj:109791994 656.366