Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0953 ATGGAAAACTATGATGAGTCTGCTGATGTTGATGTTGATTCCATTCATTCAAGTGAACGTGATTCATGGGACGAGGAGTTGGATGATGAAGAAAGTTATTCGATATCTAATATGAATCAAAGTTCAGTGGATGGCGATCATTCAGCTGATAATGGCAATGGTGATGGAGATGCAGTTGGAGGCAATAGCCAGATAAGGTTTGATACCATAACTGCTGAAGAAATTCGTTCTATGGAATTTGCCACTCTTAATGAAGCTTATGACTTTTATTACCGTTATGGTAAGTATAATGGTTTTGCTGTTAGGAAAGGTGATAGTAGGGTAAGAGGTAGTGAAGGTAATAAAGTAATAAAAATGAAGCAGTTTGTATGCAACAAACACGGTGTAAGAGAGAAGAGACACTTAGTTAGGATAGATAGGAAATTAGAACATAGACGTTTGACCCGCACTAAATGTGGAGCCAGTCTTCGTGTGAAATACAAAGCTGAAAAGGATAGATATGTAGTTTCAGCTTTTGAAGAGACTCATAACCATGAATTAACCCCAGCTAGGTTTGTGCACTTACACCCCGTATATCGTAAAATTTCTGAAGTAGATAAGGCTCAGGTGGATAGTCTTCAGAAACGTGGCATTAGAACATGTCATATAATGGGGTACATGGTTGCACAGAAGGGTGGATATGCTGATGTTGGTTTTACAAAGAAGGATTTGTACAACTATTTTGATAAAAAAATGCGTGCTGTTATTAAAGATGGTGATGTTGCCGCAGCTTTAAACTACCTGAATATGAAGTCGTCTAGTGATCCCATGCTTTATGCTGAGTATGCTGTAGACAACGTTAATGGAAGAATGAAGACTCTTTTTTGGGCTGATGGGATTAGTAGGACCGACTATTTTTGTTTTGGTGATGTGCTTGCATTTGACACGACTTACAGGAAGAACAAGTACAACTATCCGTTGGTTGTATTTTCAGGGTGTAACCACCACTCTCAAACAGTAATTTTTGGTGCTGCATTGGTGTCAGATGAAACGACGGAGACGTATAAGTGGGTGTTGAGGTGTTTCCTAGAATGCATGGAAGGTAAACAACCAAAAGCGGTGGTAACAGATGGGGATGGGGCAATGAGAGAGGCCATAAAACAGATTTTTCCCGATGCTAACCATAGGTTATGTGCTTGGCATTTGAATAAGAATGCAAGTGAGAATGTGAAGAACGGAAATAATTTTTTGGACGGTTTTTCAAAGGCCATGTACTCAAATTTTACAATAGATGAATTTGAAGAGTATTGGTCACAAATGATTAAAGAAAATGGAGTGCAAGGACATCCTTGGGTAGTCAAAACGTACGAGAATAGGTCACTGTGGGCTACTGCATATCTACGAGATAATTTTTTTGGACGTATAAGAACTACGTCGCAGTGCGAAGCTGTTAATGCAATAATTAAGAGTTATGTCAGGAAGCAAGGATGCATTTTTGAATTTATGAACAACTTTGATCAGGCTTTGAGAGATTATAGAAATAATGAGTTGGTTGCTGATTTTAAATCATCGTCTACAGATCCTGTGTTGTCGACGCAACTGCCTGTGATTGAGAGTCATGCTGGTAAAATATATACGGCGGAGCTTTTCAAAGAAGTTAGACATGAAATATTGAAAGCCGGTGAATTGATAGTTAGGGAGAAAAGCGAAGTTGGGGGTAGGAAGAATTATAGATTGACAAAATAA 1725 0.3861 MENYDESADVDVDSIHSSERDSWDEELDDEESYSISNMNQSSVDGDHSADNGNGDGDAVGGNSQIRFDTITAEEIRSMEFATLNEAYDFYYRYGKYNGFAVRKGDSRVRGSEGNKVIKMKQFVCNKHGVREKRHLVRIDRKLEHRRLTRTKCGASLRVKYKAEKDRYVVSAFEETHNHELTPARFVHLHPVYRKISEVDKAQVDSLQKRGIRTCHIMGYMVAQKGGYADVGFTKKDLYNYFDKKMRAVIKDGDVAAALNYLNMKSSSDPMLYAEYAVDNVNGRMKTLFWADGISRTDYFCFGDVLAFDTTYRKNKYNYPLVVFSGCNHHSQTVIFGAALVSDETTETYKWVLRCFLECMEGKQPKAVVTDGDGAMREAIKQIFPDANHRLCAWHLNKNASENVKNGNNFLDGFSKAMYSNFTIDEFEEYWSQMIKENGVQGHPWVVKTYENRSLWATAYLRDNFFGRIRTTSQCEAVNAIIKSYVRKQGCIFEFMNNFDQALRDYRNNELVADFKSSSTDPVLSTQLPVIESHAGKIYTAELFKEVRHEILKAGELIVREKSEVGGRKNYRLTK* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0953 574 PANTHER OS02G0262500 PROTEIN 74 558 - -
Tpr5g0953 574 MobiDBLite consensus disorder prediction 1 46 - -
Tpr5g0953 574 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 558 IPR031052 GO:0006355
Tpr5g0953 574 Pfam FAR1 DNA-binding domain 88 181 IPR004330 -
Tpr5g0953 574 Pfam MULE transposase domain 304 398 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0953 Tpr-Chr5 18618329 18620053 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g0953 MULE 2.1e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0953 - - ccaj:109792835 667.922