Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0949 ATGGGAAAGAAGGGTTGGTTTAGCATTGTAAAGAAGCTCTTTACAAGGGACACACATTCCACACAAGAGAAGAAGGAGAAAAGAAGAAAGTGGGTATTTGGGAGGCTAAAAAACAAGAGATTTCCTTCAATTGAAGCACCACCAGCATTCAAAGGAACAAGTTTATGTGAATCTGAAGAAGAACACAGTAATCATGCTTTAACAGTTGCTACTGCTGCAGCTGAAGCTGCTCTTACTGCTGCTCAGGTTGCAGTTGAGGTTGTTAGGCTCCAATCTGCGCATCAATTTAAGCGAAAACCAGAAGAAGTTAAAACTAACTGCAAGTGGAAGATTGAAGAATCTTCAGCCATCAAAATTCAAACAACATTTAGAGGTTACCTTGCAAGGAAAGCTTTGAGGGCATTGAAGGGAATAGTGATGCTTCAATCTATCATTCGTGGCAGAGCTGTAAGACGGCAAGCTATGAGTACTCTTAAATGCTTGCAGTCCATTGTGAGTATCCACTCTCAGGTCATTGCAAGGAAACTCCAAATGGTTGAAGGAAGGTTTGATTGTGGTGAATATGAAGAGATGCAAGGTTCAAGCGACAAGATCATAAGGATGGACTCAAACAGTGAAAGAAAGTGGGATACAGAAGTGAATTCCTCTAGCATGAGCAAGAAAGAAGCTTCTCTTAGGAACGAAAGAGTAAAAGAATACTCATATCACCATAGAAAATCAACTGAATCGGAAAGAAACAAAATAAATGGAAGAGAGAGGTATTGGATGGAGACACAACATTGTAAGAGTAAAGAACTCGAAGATCTAGACTCGGTTTTCAGCTCACATTGTAGAGTTGTGGAAGATTGTGAAAGTAGACAACAAAAGCTTAGACATATTCAGAGACAAAATGAAGTTGAAGGGTTAGATTCTCGGCCGATACTATTTTCAAGAAACTCTTTGCCCCAAAGATGCCATAATTTAGATGGACAATATCACTCATTTCCGAACTCTCCTGCAATTCCGACATACATGGTTGCAACGAAATCAACACAAGCAAAAGTAAGATCAACAAGTACACCAAAAACAAGGATAGTAAGGAATTAG 1086 0.3941 MGKKGWFSIVKKLFTRDTHSTQEKKEKRRKWVFGRLKNKRFPSIEAPPAFKGTSLCESEEEHSNHALTVATAAAEAALTAAQVAVEVVRLQSAHQFKRKPEEVKTNCKWKIEESSAIKIQTTFRGYLARKALRALKGIVMLQSIIRGRAVRRQAMSTLKCLQSIVSIHSQVIARKLQMVEGRFDCGEYEEMQGSSDKIIRMDSNSERKWDTEVNSSSMSKKEASLRNERVKEYSYHHRKSTESERNKINGRERYWMETQHCKSKELEDLDSVFSSHCRVVEDCESRQQKLRHIQRQNEVEGLDSRPILFSRNSLPQRCHNLDGQYHSFPNSPAIPTYMVATKSTQAKVRSTSTPKTRIVRN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0949 361 PANTHER IQ-DOMAIN 5-RELATED 1 359 - -
Tpr5g0949 361 Pfam IQ calmodulin-binding motif 114 133 IPR000048 GO:0005515
Tpr5g0949 361 PANTHER IQ-DOMAIN 11 1 359 - -
Tpr5g0949 361 SMART iq_5 134 155 IPR000048 GO:0005515
Tpr5g0949 361 SMART iq_5 111 133 IPR000048 GO:0005515
Tpr5g0949 361 Gene3D - 111 163 - -
Tpr5g0949 361 ProSiteProfiles IQ motif profile. 112 136 IPR000048 GO:0005515
Tpr5g0949 361 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Tpr5g0949 361 MobiDBLite consensus disorder prediction 222 244 - -
Tpr5g0949 361 MobiDBLite consensus disorder prediction 209 244 - -
Tpr5g0949 361 Pfam Protein of unknown function (DUF4005) 324 357 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0949 Tpr-Chr5 18540844 18543119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0949 3 357 IQD Protein Family AT5G13460 41.085 1.55e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0949 - - gmx:100777067 425.631