Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0946 ATGGGAGACAGTGACGTCGAAGGCGGTGCTGCCGGAGATGACGGTTTTCATTCTCCGATCGGCCGTAAATATCGTCCGGTATTGGCTAACGATCGTGCTGTTCTTGAGATGTCTTCGATAGATCCAGGATCTTCTTCCGCTTCTTCTTCTGTTTTTCCAGATCAACCTCCTAATCTCAGAAAAATAAATGTAAGTAAGAGTGGAAATGGTAGTTCAGATGCTAAAGATGGGAATTCTCTTCATCAACCTCAACCTAATGGACCTCAGCAGGAATCTAAACTGGAACTCTTCGGTTTTGATTCTCTTGTCAACATTCTTGGTCTCAAAAGCATGACCGGTGAGCAAATTGCACCGCCGTCTAGTCCTAGAGATGGTGAGGATATTACAATTACTGCTGGGCTGCCAAAGCCTGATGCTCCCAAACTAGGTACAATGATGGGTGTATTCATTCCATGTGTTCAGAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTGGGTATGGCTGGCATAGGAGAGACATTGGTTCTTGTTGCTATGTGTGGTACTTGTACGTTCCTTACTTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGCGGACCATACTATCTAATAGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGTATTGGTTTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCTCTGTATGTATTGGGAGCTGTAGAAACGTTTTTGAAAGCAGTTCCTTCTGCTGGGATTTTTAGAGAGACTATCACGCAAGTTAATGGTACTGCAATTGCACAACCGATAGAGAGTCCAAGTTCACATGACCTGCAAATTTATGGGATTGTTGTGACTATTGTGTTATGCTTTATTGTATTTGGAGGAGTGAAGATGATAAATCGGGTTGCACCTGCATTTCTCATACCTGTTTTATTCTCACTCATCTGCATATATTTGGGAATTCTCTTGGCAAAGGAGGATCAGCCCGCAGAGGGAGTTACTGGGTTAAGTATGAAGACTATTAAAGAAAATTGGAGTTCAGATTACCAAAAGACTAACGATGCTGGAATTCCAGAACCTGATGGTTCTGTAACCTGGGATTTCAATTCTTTGGTGGGCCTCTTTTTCCCAGCAGTGACAGGAATAATGGCAGGTTCTAACCGATCATCTTCTCTGAGAGATACTCAACGATCTATTCCTGTTGGAACTTTATCTGCAACTCTTGTAACTTCTTGTATGTATCTTATTTCTGTGGTAATGTTTGGCGCCATTGCCACCAGAGAGAAGCTTTTAACTGACAGGTTGCTTACAGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGGATTATTCTTTCAACCATGGGTGCTGCTCTTCAGAGCCTGACCGGTGCCCCACGTCTGCTTGCAGCTATAGCCAATGATGATATTTTACCTATTCTGAACTACTTTAAAGTTGCAGATGGCAGTGAGCCACATATTGCTACCCTTTTTACTGCATTCCTATGTATTGGGTGTGTCATCATTGGGAATCTTGATCTTATCACTCCAACTGTGACCATGTTTTTCCTTCTGTGTTATTCTGGTGTCAACTTATCCTGCTTCCTTCTCGATCTACTAGATGCTCCTAGTTGGCGTCCTCGGTGGAAATTTCATCATTGGAGTTTGTCGCTTCTAGGAGCATTACTTTGCGTAGTGATCATGTTCCTAATCTCTTGGTCATTCACCGTGGTTTCTTTGGCCCTTGCAAGCCTTATATACAAGTACGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCTTATTTCCAACTTGCACTTCGCAGCCTTCGGTCGCTAGGAGCAAATCAAGTGCACCCAAAGAATTGGTATCCAATTCCGCTTGTATTTTGTCGACCCTGGGGCAAACTGCCAGAAAATGTCCCCTGTCATCCAAAACTCGCAGACTTCGCTAACTGTATGAAGAAGAAAGGTCGTGGAATGACCATATTTGTCTCTATACTAGACGGGGATTACCATGAATGTGCTGAAGAGGCCAAGACAGCTTGTAAACAACTTAGTACCTACATTGAGTACAAGAATTGTGAAGGTGTGGCCGAGATTGTTGTAGCTCCTAACATGTCTGATGGTTTTCGTGGCATCGTTCAGACAATGGGCCTTGGTAATCTTAAGCCGAACATTGTGGTGATGCGTTATCCAGAAATATGGCGCCGGGAGAACTTAACAGATATCCCTGCCACCTTTGTTGGTATAATTAATGACTGCATTGTTGCAAACAAGGCAGTAGTTATAGTGAAAGGTCTGGATGAATGGCCAAATGTGTACCAGAAGCAATATGGTACAATTGATTTGTATTGGATTGTAAGAGATGGCGGTCTCATGCTACTTCTCTCTCAATTGCTTCTTACCAAAGAGAGCTTTGAGAGTTGTAAGATTCAGGTTTTCTGTATTGCAGAAGATGATGCAGATGCAGAGGGGCTAAAAGCTGATGTTAAAAAATTCCTTTACGATCTTCGGATGCAGGCAGAAGTCTTTGTCATAACCATGAAATGGGAAGAACAAGCGGATAGTGGGTCTCCGCAAGATGAGTCATTAGACGCATTTACTAGTGCCAATCAAAGAATTGTTGATTATTTAACCCAAATGAAGGCAAGAGCAGAGAGAGAAGGTACCCCTCTTATGGCAGATGGTAAGACCGTGGTTGTGAACGAGAAGCAAGTCGAGAAGTTTTTATACACAACGCTTAAGCTGAATTCCATAATTTTGAGATACTCGAGAATGGCTGCTGTTGTGTTAGTAAGTCTTCCTCCCCCTCCATTGTGCCACCCAGCATATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAATATACCAAGGATTTTGATTGTAAGAGGATATCGTAGAGATGTTGTAACTCTATTCACATAG 2967 0.4291 MGDSDVEGGAAGDDGFHSPIGRKYRPVLANDRAVLEMSSIDPGSSSASSSVFPDQPPNLRKINVSKSGNGSSDAKDGNSLHQPQPNGPQQESKLELFGFDSLVNILGLKSMTGEQIAPPSSPRDGEDITITAGLPKPDAPKLGTMMGVFIPCVQSILGIIYYIRFSWIVGMAGIGETLVLVAMCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAIAQPIESPSSHDLQIYGIVVTIVLCFIVFGGVKMINRVAPAFLIPVLFSLICIYLGILLAKEDQPAEGVTGLSMKTIKENWSSDYQKTNDAGIPEPDGSVTWDFNSLVGLFFPAVTGIMAGSNRSSSLRDTQRSIPVGTLSATLVTSCMYLISVVMFGAIATREKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHIATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGALLCVVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMTIFVSILDGDYHECAEEAKTACKQLSTYIEYKNCEGVAEIVVAPNMSDGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTDIPATFVGIINDCIVANKAVVIVKGLDEWPNVYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEDDADAEGLKADVKKFLYDLRMQAEVFVITMKWEEQADSGSPQDESLDAFTSANQRIVDYLTQMKARAEREGTPLMADGKTVVVNEKQVEKFLYTTLKLNSIILRYSRMAAVVLVSLPPPPLCHPAYFYMEYMDLLLENIPRILIVRGYRRDVVTLFT* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0946 988 TIGRFAM 2a30: K-Cl cotransporter 80 988 IPR004842 GO:0006811|GO:0015377|GO:0016021
Tpr5g0946 988 MobiDBLite consensus disorder prediction 1 25 - -
Tpr5g0946 988 MobiDBLite consensus disorder prediction 39 90 - -
Tpr5g0946 988 Pfam Solute carrier family 12 657 778 IPR018491 GO:0006811|GO:0016020|GO:0022857
Tpr5g0946 988 Pfam Solute carrier family 12 789 987 IPR018491 GO:0006811|GO:0016020|GO:0022857
Tpr5g0946 988 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 15 987 - -
Tpr5g0946 988 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 15 987 IPR004842 GO:0006811|GO:0015377|GO:0016021
Tpr5g0946 988 Pfam Amino acid permease 147 623 IPR004841 GO:0016020|GO:0055085
Tpr5g0946 988 Gene3D Amino acid/polyamine transporter I 140 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0946 Tpr-Chr5 18461106 18477423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0946 142 988 Inorganic Solute Cotransporters AT1G30450 83.019 0.0 1456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0946 K14427 - gmx:100795205 1733.77