Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0945 ATGGGCCGTGCAAAAATAGCTATGAAATACATCCAAAAGGGGAAATCTCGCAAACTATCTTACAATCAGAGAATAAATGGATTAAAAAGCAAAATTTCTGAATTTTCTAAGTCCGGAGCAAAAGCTTGCTTGATTGTGTACAATGATGATGATAATTTTGGAGCGATGACATGGCCAGAAGATCCAACAACCGTAAACTCCATGCTTCAAGAATATGAGCATCAAAAGATTGAGACACCTCCTAAGATATTTGATGTCAAAGACTACTTTGAAAATAAAAAAGATATAGCTCAAGCTGCAATTATCAAGGTGCGCAAAGATATCCTCAAGAACAAGTATCCAACTTGGCATCCAAATTTCAATCAAATGGAAGAGAAAAATCTCATTTCTTTCATTACTAGCATAGAGGAAAAGATTCAAGTTTGTAATGGAAAAATTAGCATGCTTAAAGATATGCAACAAAATGACACTAATTTCTTGCAAAACACTCCTCACATGCAAATTATGGTACAAGAGAATGTTACCATACCTCAAATGCAACAACAAATTCATGCTCCTATGAAATCAATTGATGATATACAAGCTGAGAATGTTACCATACCTCAAATGCAACAACAAATTCATGCTCCTATGAAGTCAATTGATGATATTAGTGAGATGGTGGTACAAGAGAATGTTTTCATACCTCAAATGCATGCCCCTATGAAGTCAATTGATGATATTAGTGAGATGATGGTACAAGAGAATGTTATCATACCTCAAATGCAACAACAAATTCATGCTCCTATGAAGTCAATTGATGATATTAGTGAGATGGTGGTACAAGAGAATGTTTTCATACCTCAAATGCATGCCCCTATGAAGTCAATTGATGATATTAGTGAGATGATGGTACAAGAGAATGTTACCATACATCAAATGCAACAACAAATTCATCCTCCTGTGAAGTCAATTGATTACATTAATGAGATGATGGATTTCACCGATCTTGTTGATTTGCCTCCTATTTCATCAACAAAGCAACTTGGTCAATTTGTGGAGTGTGGTAATCAAGTGTTTAATCATGATACTCAACTTGTTGATCCTATTGATTGGACTAATTATCTTGATCCTGATATTTTCAACTGGGCTAGTAACCCAGATGAGCTTTCTTGCAAAGATATTTCAACTAGGTGA 1176 0.3486 MGRAKIAMKYIQKGKSRKLSYNQRINGLKSKISEFSKSGAKACLIVYNDDDNFGAMTWPEDPTTVNSMLQEYEHQKIETPPKIFDVKDYFENKKDIAQAAIIKVRKDILKNKYPTWHPNFNQMEEKNLISFITSIEEKIQVCNGKISMLKDMQQNDTNFLQNTPHMQIMVQENVTIPQMQQQIHAPMKSIDDIQAENVTIPQMQQQIHAPMKSIDDISEMVVQENVFIPQMHAPMKSIDDISEMMVQENVIIPQMQQQIHAPMKSIDDISEMVVQENVFIPQMHAPMKSIDDISEMMVQENVTIHQMQQQIHPPVKSIDYINEMMDFTDLVDLPPISSTKQLGQFVECGNQVFNHDTQLVDPIDWTNYLDPDIFNWASNPDELSCKDISTR* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0945 391 ProSiteProfiles MADS-box domain profile. 1 36 IPR002100 GO:0003677|GO:0046983
Tpr5g0945 391 PANTHER PROTEIN, PUTATIVE-RELATED 3 275 - -
Tpr5g0945 391 PANTHER MADS BOX PROTEIN 3 275 - -
Tpr5g0945 391 SMART madsneu2 1 59 IPR002100 GO:0003677|GO:0046983
Tpr5g0945 391 SUPERFAMILY SRF-like 1 75 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0945 Tpr-Chr5 18426890 18428065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0945 1 140 Type I MADS-box Gene Family AT5G55690 30.137 1.26e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0945 - - cam:101509886 242.662