Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0937 ATGGAAGGCGAAATTTACGAAGTTGACGAAGATAAACCGAGGCGACCTGTTGTGCTTGGCCTTTTTGCAACGGGCATTGTTCCAGCTGTTGCTCAACCAAGTAATCCTCCTAATGTGCCGCAACCGATAGAAATAGACACATCGTCTCACTTTGCGACTGATAGGCAAAAGAGAGACAGAGATGAGTTGATCAAATGGGCTCGAAGTGTGTCAGAAAGTTTAAGGTTCGCCATTATAGTTAGGCGATCCGATTCGGGCGAAAAGAGAAAGGCTCAATTGGTGTTAGAGTGTGAACGTAGTGGGAAGTATGTTCCAGCCAAGAAGAAGTTGAAATCCGATTCGTCCGGAACGAGAAAATGCGAATGTCCATTCCGACTTCGTGGTTATTACAACAAGGAAACAAAACTATGGCGTTTGACTGTTGTCAACGGTATGCATAACCACGAGTTGGACAAAGGGCTTGAAGGGCATCTCGTGGCGGGGCGTTTGAAACCGCAGGAGAAGGATTTTATGGACGAGATGACAAGGAATGCGGTGGCTCCAAAAAAACATATTGTCCACATTAAAGGAGAGAGATCCAGAGAACAAGACCTCGGCAAAGCAAGTGTACAACGCTCGTCATAG 624 0.4615 MEGEIYEVDEDKPRRPVVLGLFATGIVPAVAQPSNPPNVPQPIEIDTSSHFATDRQKRDRDELIKWARSVSESLRFAIIVRRSDSGEKRKAQLVLECERSGKYVPAKKKLKSDSSGTRKCECPFRLRGYYNKETKLWRLTVVNGMHNHELDKGLEGHLVAGRLKPQEKDFMDEMTRNAVAPKKHIVHIKGERSREQDLGKASVQRSS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0937 207 Pfam Transcription factor AFT 99 150 IPR014842 GO:0000981|GO:0036086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0937 Tpr-Chr5 18202775 18203398 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g0937 AFT 1.3e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0937 - - mtr:MTR_6g464570 129.413