LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g0899	ATGTCTGAAACACATTCACTTCCACAAGTCATGCCTATAACCAATAACTCATTTATCAACTGTGCATCATTTCTGGATCTTGGGACTGCACGAGAGGTTGATGAAGCTCATGGTGCACGTGTGAGTGAAATGGTTAGCAGCATTAACACTTACCAGATGGAGTGTGATCCTTATAATGTCTTGGGAAGACTACCTCAATGTTTTGTTCGGGAGTTTGGTGATTTAATTGATACACATGTTATCCTTCAGGATCCTAATGGCAACGAGATCGAGGTTAGAGTTTTGAGAAAGTGTAATGAAATGTTCTTTGAACAGGGGTGGCTGGTTCTTAGGGACTTTTACAATCTTTGGTTTGGAGCTTGGCTTAGAATTAGATATGCTAATCCCAGGCTTTTGGCAATAAGTCTCACATCCAGATGGGGTATTGAGGTTCCTTATCCTTTGCATGATCCTCCTTCTAAGCATATGTTGGCTTCAGTTGGTATACATTCTAAGATTGGGCTATCCACCGTTGCTGGAGTTTCCTCTAATCCAGTTGTGCCACCTAAATCATTTACACGTTCTTATTTTAAGAAATTAACATCATATGATGTTGATTCTGGCATTTTGATTTTGCCCTGGTATGGTTTTGGCGAATTTGCATTCGCCTTTACATTCTCGAATATAGTTTTGGTTGATCATACCGGATGTCGATATCCATGTAGTTTACAGTTTGCAGTAGATGATGACGGTGAATTGGCTTGCAAAGTTTCTGGCTATTGGATGGAATTTTGCAAAAAACATCACTTGATGCAGGGTGATAGGATTCGTTTTGCTGTTAATGAGCCTGCACGAAATTATGTCATGTATGTCTGTGTTTATCCTCAGATAGGAAGGAAACCACACTCAGTTATCCTTTGA	900	0.3989	MSETHSLPQVMPITNNSFINCASFLDLGTAREVDEAHGARVSEMVSSINTYQMECDPYNVLGRLPQCFVREFGDLIDTHVILQDPNGNEIEVRVLRKCNEMFFEQGWLVLRDFYNLWFGAWLRIRYANPRLLAISLTSRWGIEVPYPLHDPPSKHMLASVGIHSKIGLSTVAGVSSNPVVPPKSFTRSYFKKLTSYDVDSGILILPWYGFGEFAFAFTFSNIVLVDHTGCRYPCSLQFAVDDDGELACKVSGYWMEFCKKHHLMQGDRIRFAVNEPARNYVMYVCVYPQIGRKPHSVIL*	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g0899	299	Gene3D	-	43	138	IPR015300	-
	Tpr5g0899	299	SUPERFAMILY	DNA-binding pseudobarrel domain	186	285	IPR015300	-
	Tpr5g0899	299	SUPERFAMILY	DNA-binding pseudobarrel domain	63	131	IPR015300	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g0899	Tpr-Chr5	17019611	17024962	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr5g0899	63	150	B3 DNA Binding Superfamily	AT1G49475	30.682	2.75e-06	45.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g0899	-		K08474	mtr:MTR_4g117740	65.4698