Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0883 ATGAGTTTCCAGAACGGTTCTTCTCCTCGCCGGACTCCGCTGCCGGAGAATACTGATATTGAAGCTGGTCCGTTGTCTCGCCGTTCTTCTGACGTTGATGACGACGGTGAAATTTCCGATCCGTTTGATATTGTTAGAACAAAGCACGCTTCTATTGATCGACTTCGCCGCTGGAGACAAGCAGCGCTTGTGCTGAATGCTTCCCGTCGATTTCGTTATACCTTGGACTTGAAGAAAGAAGAAGAGAAGAAGCAAATACTGAGAAAGATTAGAGCGCATGCACAAGCCATTAGAGCAGCATATCTTTTCAAAGCAGCTGGGGGGCAAGCACAACCAAATAGGGAACGGCAAGGGCAAGTGGGTGCTATAAAACCCCCTTCAACAACCTCTACTGGTGAATTTCCAATTGGACCAGAGCAACTTGCTTCGATTTCAAGGGAGCATGATACTGCTTCTTTGCAGCAATATGGAGGGGTTGCAGGGGTATCGAATTTATTGAAAACTGATTTAGAGAAGGGAATTAATGGTGATGACGCTGACTTGCTGAAACGGAGGAATGCGTTTGGTTCCAACAATTACCCTCGAAAGAAAGGAAGAAGTTTTATGATGTTTATGTGGGATGCTTGCAAGGACCTGACCTTGGTTATTTTAATGGTAGCTGCAGCAGCTTCATTGGCATTGGGGATAAAATCTGAGGGTATTAAGGAAGGTTGGTATGATGGAGGCAGCATTGCTTTTGCGGTTGTTCTTGTTATTGTTGTTACAGCTGTAAGTGATTATAAGCAGTCTCTTCAGTTTCGAGACCTAAATGAAGAGAAGAGAAATATACACCTGGAGGTTGTTAGAGGTGGTAGAAGGGTTGAGATCTCAATATACGATCTTGTTGTTGGGGATGTTATACCTCTTAATATTGGTAACCAGGTCCCTGCTGATGGAATTGTGATCACTGGTCACTCTCTTTCAATTGATGAATCAAGCATGACAGGGGAGAGCAAAATTGTCCATAAGGATTCCAAGGATCCCTTTATGATGTCTGGTTGTAAGGTTGCAGATGGCAGTGGCACTATGCTGGTAACGGGTGTTGGAATTAATACTGAGTGGGGCCTTCTAATGGCTAGCATTTCAGAAGATACCGGTGAAGAAACACCTTTACAGGTCCGCTTGAATGGGGTAGCCACCTTCATTGGTATAGTCGGACTCTCTGTTGCTGTTCTTGTCCTGATTGTGCTACTAGCCCGATATTTCTCTGGGCATACGAAGAATGCTGATGGGACAAAACAATTTACAGCAGGCAGGACTAAAATTGGGGATGCTGTTGATGGAGCAATTAAGATCATAACTGTTGCGGTCACCATTGTAGTTGTTGCAGTGCCTGAGGGGCTTCCACTTGCAGTTACTTTAACACTTGCCTACTCGATGCGGAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTTTCTGCCTGTGAGACAATGGGCTCTGCTACAACCATATGCAGTGATAAGACTGGCACATTGACTATGAATCAGATGACTGTGGTCGAGGTTTATGCCGGGGGAAGTAAGATTGATCCTCCTCACCAGTTGGAGAGCTCTCCTAAGCTACGGTCTCTACTCATTGAAGCTGTTGCACAGAACACTAATGGCAGTGTTTTTGTCCCTGAGGGTGCTAATGATGTCGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGAATTAAGGTTGGGATGAATTTTGCGACTGATCGGTCAGAATCATCAATTATACATGTCTTTCCATTTAACTCTGAGAAAAAAAGAGGCGGAGTTGCAATACAGACGGATGACTCCGATGTTCATATACATTGGAAAGGTGCTGCTGAGATTGTTCTAGCCTGCTGTACAGGAGGGTATATTGATGCAAATGACCGGTTGGTGGAGATGAGTGAGGATAAGATGAATTTTTTCAAAAAAGCTATTGAAGACATGGCTGCCGAAAGTCTACGTTGTGTTGCCATTGCATATAGATCATATGAGAAGGAGAAAGTTCCAGATAACGAGGAACAACTTGCTCACTGGTCTTTGCCAGATGATGACCTTGTTTTACTAGCTATTGTTGGTATCAAGGACCCTTGTCGACCTGGTGTCAAGGATTCAGTACAGCTTTGCCAAAAAGCCGGGGTTAAGGTAAAGATGGTCACGGGTGACAATGTGAAAACTGCAAAGGCAATTGCTGTGGAATGTGGAATACTTAGTTCACTTGCTGATGCTACTGAGAGAACTGTCATTGAAGGCAAAACATTTCGAGCCTTGTCAGATTCAGAAAGAGAAGAAATTGCGGACTCAATATCGGTTATGGGAAGGTCATCTCCCAATGACAAACTATTGTTAGTACAAGCATTAAGGAGGAAGGGTCATGTTGTGGCTGTTACTGGGGATGGAACGAATGATGCTCCTGCACTTCACGAGGCGGATATTGGTCTTGCAATGGGTATTGCTGGTACAGAAGTTGCCAAGGAGAGCTCTGATATCATTATTTTAGACGACAACTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGTCGGTCTGTTTATGCGAATATTCAGAAATTTATCCAGTTTCAGCTGACAGTCAATGTGGCAGCTCTTGTTATAAATGTTGTTGCTGCAGTTTCCTCTGGTGATGTTCCACTGAACGCAGTTCAGCTTCTCTGGGTGAATCTTATCATGGATACTCTGGGAGCACTAGCCTTGGCAACTGAACCGCCAACTGATCACCTGATGGATCGGACTCCTGTGGGTCGAAGGGAACCTCTCATAACAAATATTATGTGGAGGAATTTGCTGATACAGGCAATGTATCAAGTAGCTGTCTTACTTGTTCTCAATTTCCGAGGTATAAGCATATTGGGTCTGGAGCATCAACAGTCTCAACATGCAATCTTAGTAAAGAACACTTTGATCTTCAATGCATTTGTTATCTCTCAGATCTTCAATGAATTTAATGCACGTAAGCCAGATGAATTCAACATTTTTAAAGGAGTCACCAAAAACTACCTCTTTATGGGGATAGTGGGATTTACTGTTGTGCTTCAGGTTATCATTGTTGAATTTCTTGGGAAGTTCACTACAACTACTAGGCTTAATTGGAAGCAGTGGCTCATTTCTGTCGTTATTGGATTCATTGGTTGGCCCCTTGCTGTGGTTGGGAAATTGATACCAGTACCAGAAACTCCCATCAATGACTTTTTCCCTAGATTCCGAAAAACTGAAAAAAAGAAGGAAACTGAGGCTTCTCAATAG 3291 0.436 MSFQNGSSPRRTPLPENTDIEAGPLSRRSSDVDDDGEISDPFDIVRTKHASIDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAGGQAQPNRERQGQVGAIKPPSTTSTGEFPIGPEQLASISREHDTASLQQYGGVAGVSNLLKTDLEKGINGDDADLLKRRNAFGSNNYPRKKGRSFMMFMWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVVLVIVVTAVSDYKQSLQFRDLNEEKRNIHLEVVRGGRRVEISIYDLVVGDVIPLNIGNQVPADGIVITGHSLSIDESSMTGESKIVHKDSKDPFMMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVLVLIVLLARYFSGHTKNADGTKQFTAGRTKIGDAVDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEVYAGGSKIDPPHQLESSPKLRSLLIEAVAQNTNGSVFVPEGANDVEVSGSPTEKAILHWGIKVGMNFATDRSESSIIHVFPFNSEKKRGGVAIQTDDSDVHIHWKGAAEIVLACCTGGYIDANDRLVEMSEDKMNFFKKAIEDMAAESLRCVAIAYRSYEKEKVPDNEEQLAHWSLPDDDLVLLAIVGIKDPCRPGVKDSVQLCQKAGVKVKMVTGDNVKTAKAIAVECGILSSLADATERTVIEGKTFRALSDSEREEIADSISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRTPVGRREPLITNIMWRNLLIQAMYQVAVLLVLNFRGISILGLEHQQSQHAILVKNTLIFNAFVISQIFNEFNARKPDEFNIFKGVTKNYLFMGIVGFTVVLQVIIVEFLGKFTTTTRLNWKQWLISVVIGFIGWPLAVVGKLIPVPETPINDFFPRFRKTEKKKETEASQ* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0883 1096 Gene3D - 50 105 - -
Tpr5g0883 1096 PANTHER CALCIUM-TRANSPORTING ATPASE 33 1086 - -
Tpr5g0883 1096 SFLD C1.7: P-type atpase like 481 859 - -
Tpr5g0883 1096 SFLD p-type atpase 481 859 IPR044492 -
Tpr5g0883 1096 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 506 704 IPR023299 GO:0000166
Tpr5g0883 1096 PANTHER CATION TRANSPORTING ATPASE 33 1086 - -
Tpr5g0883 1096 Pfam E1-E2 ATPase 277 477 - -
Tpr5g0883 1096 Pfam Cation transporting ATPase, C-terminus 892 1068 IPR006068 -
Tpr5g0883 1096 PRINTS Sodium/potassium-transporting ATPase signature 242 262 - -
Tpr5g0883 1096 PRINTS Sodium/potassium-transporting ATPase signature 492 513 - -
Tpr5g0883 1096 PRINTS Sodium/potassium-transporting ATPase signature 617 635 - -
Tpr5g0883 1096 SUPERFAMILY Calcium ATPase, transmembrane domain M 156 1070 IPR023298 -
Tpr5g0883 1096 SMART Cation_ATPase_N_a_2 155 229 IPR004014 -
Tpr5g0883 1096 SUPERFAMILY Calcium ATPase, transduction domain A 277 372 IPR008250 -
Tpr5g0883 1096 Pfam Cation transporter/ATPase, N-terminus 157 224 IPR004014 -
Tpr5g0883 1096 Gene3D - 180 375 - -
Tpr5g0883 1096 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 148 1071 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Tpr5g0883 1096 ProSitePatterns E1-E2 ATPases phosphorylation site. 501 507 IPR018303 -
Tpr5g0883 1096 PRINTS P-type cation-transporting ATPase superfamily signature 323 337 - -
Tpr5g0883 1096 PRINTS P-type cation-transporting ATPase superfamily signature 499 513 - -
Tpr5g0883 1096 PRINTS P-type cation-transporting ATPase superfamily signature 700 711 - -
Tpr5g0883 1096 PRINTS P-type cation-transporting ATPase superfamily signature 722 732 - -
Tpr5g0883 1096 PRINTS P-type cation-transporting ATPase superfamily signature 807 826 - -
Tpr5g0883 1096 PRINTS P-type cation-transporting ATPase superfamily signature 831 843 - -
Tpr5g0883 1096 Gene3D - 509 707 IPR023299 GO:0000166
Tpr5g0883 1096 CDD P-type_ATPase_Ca_PMCA-like 181 940 - -
Tpr5g0883 1096 Pfam haloacid dehalogenase-like hydrolase 496 821 - -
Tpr5g0883 1096 Gene3D - 207 1058 - -
Tpr5g0883 1096 SUPERFAMILY HAD-like 497 912 IPR036412 -
Tpr5g0883 1096 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 773 887 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g0883 1096 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 439 522 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g0883 1096 Gene3D - 496 852 IPR023214 -
Tpr5g0883 1096 Pfam Ca2+-ATPase N terminal autoinhibitory domain 40 82 IPR024750 GO:0005516
Tpr5g0883 1096 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0883 Tpr-Chr5 16695932 16713283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0883 7 1092 Primary Pumps ATPases AT5G57110 73.045 0.0 1593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0883 K01537 - gmx:100820121 1814.66