Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0850 ATGAAAATCAAATGGAAATCAATTTTCCCAGCAAGTTGTTTCAAAGGAGAGTATCCATCACCAAAGCCAAAAAAAGTGGTGTCAACAAAACCAAGAAGCTCTTCAACATCAACTCATAGGATTTCAATAGAAGAAATGAGTTATCCAAACACAACCCAAGAGGATTTGTCTATTTCTTTAGTAGGGTCTAATCTTCATGTATTTACAGTTGCTGAGCTTAAGGTTATAACACAACACTTTTCTTCTAGTAATTTTATTGGAGAAGGTGGGTTTGGACCTGTTCATAAAGGGTTTATTGAAGATAGGGTTAGGCCTGGTTTGAAGGCTCAACCTGTTGCTGTTAAGCTCTTGGACTTGGAAAGTAAACAAGGTCACAAAGAATGGTTGACTGAAGTTGTTGTTTTGGGACAATTAAGGCATCCACATCTTGTGAAGCTAATAGGATATTGTTGTGAAGATGAACATAGACTTTTGGTATATGAATATTTACCAAGAGGCAGCTTGGAAAATCAATTATTTAGAAGATTCTCAGCATCACTACCATGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAAGGTTTAGCTTTTCTTCATGATGCTGAGCAACCAGTTATTTATAGAGATTTCAAAGCTTCAAACATCTTGTTAGACTCGGATTATAATGCAAAACTCTCTGACTTTGGGTTGGCAAAAGATGGTCCTGAAGGAGATGACACCCACGTTTCAACAAGAGTTATGGGCACTCAAGGCTATGCTGCCCCAGAATATGTCATGACAGGTCACTTGACGGCCAAGAGTGACGTGTACAGCTTTGGAGTAGTTTTGTTGGAATTGCTAACAGGGAAAAAGTCAGTGGACAAAAATCGTCCTCCAAGGGAACAAAACCTAGTAGATTGGGCAAGACCAATGTTAATTGATCCAAGAAAACTTAGTAAATTAATGGATCCTAAACTTGAAGGACAATACTCTGAAATGGGTACTAAAAAAGCAGCTGCATTGGCTTATCAATGTCTTAGCCATAGACCCAAGAGTAGGCCAACAATGAGCCAAGTGGTTAAGATTTTGGAACCCTTACAAGATTTTGATGATATTCCAATTGGACCTTTTGTTTACACAGTTCCAGTTGATAATAATGGAGGGGTTAAAGAAAAAGATCAAACAAAGGAATGTGAAACACCTAAGGAGAGGAAAAGGGAAAATGGTCACTATCGTAGGAATGGCCATAGGCATCATCCACTTAAATCACCGAGGTCGCCAAACCCTCAATCGCAACCACAATCACGGCCACAGTCACAGCCATCTCCACGGCAACAGGCACAACCGTCACCACGGCAACAGTCACAATCGTCACCACGGCCACGTCTGCAGGTTGACAAATACCGAAATGGTAGGGGAAGTTCATCGAATTCTCCTCCGCAAAACATAGCTTAA 1437 0.4029 MKIKWKSIFPASCFKGEYPSPKPKKVVSTKPRSSSTSTHRISIEEMSYPNTTQEDLSISLVGSNLHVFTVAELKVITQHFSSSNFIGEGGFGPVHKGFIEDRVRPGLKAQPVAVKLLDLESKQGHKEWLTEVVVLGQLRHPHLVKLIGYCCEDEHRLLVYEYLPRGSLENQLFRRFSASLPWSTRMKIAVGAAKGLAFLHDAEQPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAKSDVYSFGVVLLELLTGKKSVDKNRPPREQNLVDWARPMLIDPRKLSKLMDPKLEGQYSEMGTKKAAALAYQCLSHRPKSRPTMSQVVKILEPLQDFDDIPIGPFVYTVPVDNNGGVKEKDQTKECETPKERKRENGHYRRNGHRHHPLKSPRSPNPQSQPQSRPQSQPSPRQQAQPSPRQQSQSSPRPRLQVDKYRNGRGSSSNSPPQNIA* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0850 478 Pfam Protein tyrosine and serine/threonine kinase 84 357 IPR001245 GO:0004672|GO:0006468
Tpr5g0850 478 MobiDBLite consensus disorder prediction 382 478 - -
Tpr5g0850 478 CDD STKc_IRAK 86 360 - -
Tpr5g0850 478 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g0850 478 MobiDBLite consensus disorder prediction 20 39 - -
Tpr5g0850 478 SUPERFAMILY Protein kinase-like (PK-like) 65 374 IPR011009 -
Tpr5g0850 478 PANTHER OS01G0588500 PROTEIN-RELATED 25 418 - -
Tpr5g0850 478 MobiDBLite consensus disorder prediction 383 402 - -
Tpr5g0850 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Tpr5g0850 478 MobiDBLite consensus disorder prediction 403 417 - -
Tpr5g0850 478 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 25 418 - -
Tpr5g0850 478 MobiDBLite consensus disorder prediction 431 478 - -
Tpr5g0850 478 Gene3D Phosphorylase Kinase; domain 1 41 162 - -
Tpr5g0850 478 Gene3D Transferase(Phosphotransferase) domain 1 163 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0850 Tpr-Chr5 15521374 15524877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0850 66 357 Glycoside Hydrolase AT3G07070 54.576 9.93e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr5g0850 PK_Tyr_Ser-Thr 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0850 - - cam:101488466 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3464 2 38000504 38003557 Tpr5g0850 5 15521374 15524877 PCT