Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0822 ATGAATATCATGAACAAGAACAAGTACCCTTTTACTCCATCACAATGGCAAGAACTTGAACATCAAGCTCTTATTTACAAGTACATGGCTTCTGGTATCTCTATTCCACCTGATCTTCTTTTCACCATCAGAAAAAGCTACTTGGATAGTCCTCTCTCTTCAAGACTTTTGCTTAACCAGCCACAACAAAACTATGGATGGAACTATCTGCAAATGGGTTTAGGAAGAAAAATAGATCCTGAACCAGGTAGATGCAGAAGAACAGATGGAAAAAAATGGAGATGTTCAAAAGAAGCATATCCAGATTCTAAATACTGTGAAAGACACATGCATAGAGGAAAAAACCGTTCAAGAAAGCCTGTGGAAATTTCAAAAACAACACCAACAAATAGTAATACTAATAATAATGCTTCAATATTTGGAATCTCATCAATTACCAAAAATACCCCTGTATCAATAACTAATTCTTCTTTGTCCTTTGATACACAAAATCTTCACCAAAACTACCCTCAAAATTCCTTTATGTATCCCCATATAACAACATCAAGGTCATTGTCAACATCTGGTATTGGTTTGTCTTTTGAAGACAATAGTGCTCCCTTGTTTCTTGACACCATTTCTTGCTCTCAGAATATTACAGATTACAGGAACAGGTATGTATATGGACAGAAAGAAGAGGTAGATGAATATGCATTCTTCAAAGAACCTTCTGGTAGCACTACTATGAAACATGATCCTTGGCAACTAACACCACTCACTATGAGTTCTTCCTCATCTTCTTCATCTTTGAGACAGAGAAGCTTTTCATCTTTGTCCAATGATTACTCTTCCTTTTTGCAACTTCAGAGTCTAAATGGACACTCAAAACAGCAAGAGCAAGATGAACCTCAGAAAACCGTTCATCGCTTCTTTGACGAATGGCCACACAAAGAGAGAGATCAATGGCTTGATTTGGATGATAAATCATCCACTACTCAACTCTCAATTTCTATTCCATCTTCTGCTCATGATTTTCCAACTTTCACTTCGAGAAATCACCATGATGGTTGA 1050 0.3667 MNIMNKNKYPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIRKSYLDSPLSSRLLLNQPQQNYGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEISKTTPTNSNTNNNASIFGISSITKNTPVSITNSSLSFDTQNLHQNYPQNSFMYPHITTSRSLSTSGIGLSFEDNSAPLFLDTISCSQNITDYRNRYVYGQKEEVDEYAFFKEPSGSTTMKHDPWQLTPLTMSSSSSSSSLRQRSFSSLSNDYSSFLQLQSLNGHSKQQEQDEPQKTVHRFFDEWPHKERDQWLDLDDKSSTTQLSISIPSSAHDFPTFTSRNHHDG* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0822 349 ProSiteProfiles QLQ domain profile. 10 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tpr5g0822 349 SMART QLQ_2 9 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tpr5g0822 349 MobiDBLite consensus disorder prediction 110 132 - -
Tpr5g0822 349 Pfam WRC 80 122 IPR014977 -
Tpr5g0822 349 ProSiteProfiles WRC domain profile. 79 123 IPR014977 -
Tpr5g0822 349 PANTHER - 5 336 IPR031137 GO:0005634|GO:0006351|GO:0032502
Tpr5g0822 349 Pfam QLQ 10 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tpr5g0822 349 PANTHER GROWTH-REGULATING FACTOR 6 5 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0822 Tpr-Chr5 14871753 14875116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0822 10 122 GRF Transcription Factor Family AT3G13960 71.681 6.25e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Tpr5g0822 WRC 7.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0822 - - gmx:100781613 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3453 2 37918061 37920402 Tpr5g0822 5 14871753 14875116 PCT